RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ZBTB6Q15916 424 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 KLHL22Q53GT1 634 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 VWA5B1Q5TIE3 1220 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CLEC6AQ6EIG7 209 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ESRP1Q6NXG1 681 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 GALNT5Q7Z7M9 940 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CACUL1Q86Y37 369 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CFAP52Q8N1V2 620 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NAT8LQ8N9F0 302 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 CLHC1Q8NHS4 586 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TFAP2BQ92481 460 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NSMCE3Q96MG7 304 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TAS2R1Q9NYW7 299 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 DTLQ9NZJ0 730 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ZMAT5Q9UDW3 170 aaKnown RBP6.92□□□□□ -1.3
CTNND1-236ENST00000533667 PFDN2Q9UHV9 154 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 FBXL21Q9UKT6 434 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 C2orf71A6NGG8 1288 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 NEDD8-MDP1E9PL57 170 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 DUSP11O75319 330 aaKnown RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 EOMESO95936 686 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 IFNA6P05013 189 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 APODP05090 189 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 RPLP0P05388 317 aaKnown RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 IMPDH1P20839 514 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 MSX2P35548 267 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ASPAP45381 313 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 CCR10P46092 362 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 MAPK12P53778 367 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 VBP1P61758 197 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ECT2LQ008S8 904 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 NRG1Q02297 640 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 HSF2Q03933 536 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 CHIT1Q13231 466 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 GPR33Q49SQ1 333 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 TREML2Q5T2D2 321 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 RNF19BQ6ZMZ0 732 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 USP43Q70EL4 1123 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 SERPINA9Q86WD7 417 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 LIX1Q8N485 282 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 XAGE5Q8WWM1 108 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 AZIN2Q96A70 460 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ASB9Q96DX5 294 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 PCED1BQ96HM7 432 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 RAB11FIP5Q9BXF6 653 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 APOBEC3GQ9HC16 384 aaKnown RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 IMP3Q9NV31 184 aaKnown RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 EVLQ9UI08 416 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 RIMBP3CA6NJZ7 1639 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 RIMBP3BA6NNM3 1639 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 RIMBP3Q9UFD9 1639 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 XKRYO14609 159 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ZBTB11O95625 1053 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 CXCL14O95715 111 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 TOP3BO95985 862 aaKnown RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 UGT2B4P06133 528 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 CDH1P12830 882 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 HERVK_113P63132 956 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 WDR45BQ5MNZ6 344 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 LDLRAP1Q5SW96 308 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 C6orf183Q5T699 404 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 PAOXQ6QHF9 649 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 AHSA2Q719I0 299 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 IFNL1Q8IU54 200 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ZDHHC21Q8IVQ6 265 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 RGL4Q8IZJ4 473 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 CMASQ8NFW8 434 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF563Q8TA94 476 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 VANGL1Q8TAA9 524 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 CLEC4DQ8WXI8 215 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 RIT1Q92963 219 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF514Q96K75 400 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 PHF12Q96QT6 1004 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ERVK-6Q9BXR3 956 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 C1orf21Q9H246 121 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 HSD3B7Q9H2F3 369 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 EHD1Q9H4M9 534 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 MAGEE1Q9HCI5 957 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 OXSMQ9NWU1 459 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 TRNAU1APQ9NX07 287 aaKnown RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 MLXQ9UH92 298 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 SHPRHQ149N8 1683 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 FER1L4A9Z1Z3 1794 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 SLIT2O94813 1529 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF99A8MXY4 864 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 SCN2BO60939 215 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 KRT33AO76009 404 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 AP2A2O94973 939 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 OR4F21O95013 312 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 METTL18O95568 372 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 SAGP10523 405 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 IGFALSP35858 605 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 TAS2R39P59534 338 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 STXBP1P61764 594 aaKnown RBP6.91□□□□□ -1.3
CTNND1-236ENST00000533667 MVKQ03426 396 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 TRIM32Q13049 653 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 NOGQ13253 232 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 EIPR1Q53HC9 387 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 CPNE9Q8IYJ1 553 aa6.91□□□□□ -1.3
CTNND1-236ENST00000533667 C11orf24Q96F05 449 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms