RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 RNF187Q5TA31 235 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 DUS1LQ6P1R4 473 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 FOXR1Q6PIV2 292 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 NAPRTQ6XQN6 538 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 PLXDC1Q8IUK5 500 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 CILP2Q8IUL8 1156 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 PDIK1LQ8N165 341 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 BBOF1Q8ND07 529 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 LPGAT1Q92604 370 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 CCDC74BQ96LY2 380 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 PWWP2AQ96N64 755 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 CMKLR1Q99788 373 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 ERP44Q9BS26 406 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 NAT9Q9BTE0 207 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 TSSK1BQ9BXA7 367 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 KIR3DX1Q9H7L2 352 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 ASCL3Q9NQ33 180 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 IL1RAPL1Q9NZN1 696 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 LOXL2Q9Y4K0 774 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
CCDC90B-216ENST00000529856 MAP1BP46821 2468 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 DMXL2Q8TDJ6 3036 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 BHMG1C9JSJ3 638 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 NDC80O14777 642 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 GPC4O75487 556 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 TNFSF15O95150 251 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 TTC4O95801 387 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 S1PR4O95977 384 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 AOAHP28039 575 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 ACADLP28330 430 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 NDUFS1P28331 727 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 RBMS1P29558 406 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 ADARP55265 1226 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 ARL4CP56559 192 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 CKAP4Q07065 602 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 CBLBQ13191 982 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 KRT33BQ14525 404 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 BRD3Q15059 726 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 TBC1D25Q3MII6 688 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 PTRHD1Q6GMV3 140 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 CENPUQ71F23 418 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 ARHGAP22Q7Z5H3 698 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 PDZD3Q86UT5 571 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 IGDCC3Q8IVU1 814 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 LMNTD2Q8IXW0 634 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 KRT222Q8N1A0 295 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 RCBTB1Q8NDN9 531 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 PHC3Q8NDX5 983 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 LKAAEAR1Q8TD35 194 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 ZNF592Q92610 1267 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 TFGQ92734 400 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 LRRC39Q96DD0 335 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 ZNF578Q96N58 590 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 BIRC8Q96P09 236 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 PANX3Q96QZ0 392 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 FERD3LQ96RJ6 166 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 RAB33BQ9H082 229 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 C20orf96Q9NUD7 363 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 INTS10Q9NVR2 710 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 AKAP7Q9P0M2 348 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 EPHA6Q9UF33 1036 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 GNPTGQ9UJJ9 305 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 CDYLQ9Y232 598 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 VPS9D1Q9Y2B5 631 aa12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 MN1Q10571 1320 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-216ENST00000529856 IGF2RP11717 2491 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 UBA6A0AVT1 1052 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 A8MU76 341 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 CDRT15L2A8MXV6 281 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 KIF2AO00139 706 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 CAPN5O15484 640 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 TLX3O43711 291 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 C9P02748 559 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ESR1P03372 595 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 APOA4P06727 396 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ITGA2BP08514 1039 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 JMJD7P0C870 316 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 HGFP14210 728 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 FMO4P31512 558 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ELK3P41970 407 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 CAPZBP47756 277 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 GFERP55789 205 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 EIF3BP55884 814 aaKnown RBP12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ERVPABLB-1P60509 514 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 HSPA14Q0VDF9 509 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 CTBP1Q13363 440 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 BOP1Q14137 746 aaKnown RBP12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 CRYMQ14894 314 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 PLCL1Q15111 1095 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 HIF1AQ16665 826 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 WHAMMP3Q1A5X7 153 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 SYTL3Q4VX76 610 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ZNF789Q5FWF6 425 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 SPANXN3Q5MJ09 141 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 CTSL3PQ5NE16 218 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 SNAP47Q5SQN1 464 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms