RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 MC1RQ01726 317 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 ADCY2Q08462 1091 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 NIPAL4Q0D2K0 466 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 CHAF1BQ13112 559 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 SNX1Q13596 522 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 PEX6Q13608 980 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 SEPT6Q14141 434 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 DPYSL2Q16555 572 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 TAZQ16635 292 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 PRR30Q53SZ7 412 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 HENMT1Q5T8I9 393 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 LCE2CQ5TA81 110 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 MARC1Q5VT66 337 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 CPZQ66K79 652 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 FAM199XQ6PEV8 388 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 C6orf15Q6UXA7 325 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 USP45Q70EL2 814 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 GSTA5Q7RTV2 222 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 ATCAYQ86WG3 371 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 LZTR1Q8N653 840 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 ARRDC2Q8TBH0 407 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 HSPH1Q92598 858 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 RSC1A1Q92681 617 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 PGM2Q96G03 612 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 TGM7Q96PF1 710 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 OR6C1Q96RD1 312 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 HERPUD2Q9BSE4 406 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 TDRD1Q9BXT4 1180 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 TRIT1Q9H3H1 467 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 ZWILCHQ9H900 591 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 RCOR3Q9P2K3 495 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 ATXN10Q9UBB4 475 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 CPNE7Q9UBL6 633 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 CHKBQ9Y259 395 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 NEU2Q9Y3R4 380 aa8.39□□□□□ -1.07
TGFBR3-208ENST00000529608 UNC79Q9P2D8 2635 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 MED13Q9UHV7 2174 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 LILRA5A6NI73 299 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 MKRN2OSH3BPM6 223 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 H3BRJ5 948 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 MFSD11O43934 449 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 NUAK1O60285 661 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 SPAG6O75602 509 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 CREG1O75629 220 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 AGFG2O95081 481 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 BRAFP15056 766 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 ZNF30P17039 623 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 ZNF8P17098 575 aaPredicted RBP8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 KDELR1P24390 212 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 GJC1P36383 396 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 CDKN2BP42772 138 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC25A11Q02978 314 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 LAMB3Q13751 1172 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC29A2Q14542 456 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 ZSCAN26Q16670 478 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 PLA2G4EQ3MJ16 856 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 KRT71Q3SY84 523 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 ATP13A4Q4VNC1 1196 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 KHDC1Q4VXA5 237 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 BOLA3Q53S33 107 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 RALGPS1Q5JS13 557 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 ALG1LQ6GMV1 187 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 CERS6Q6ZMG9 384 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 BBS12Q6ZW61 710 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 PCGF5Q86SE9 256 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC9B2Q86UD5 537 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 VSIG1Q86XK7 387 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 RELL1Q8IUW5 271 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 PSTKQ8IV42 348 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 MAP7D3Q8IWC1 876 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 ATPAF2Q8N5M1 289 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 CT55Q8WUE5 264 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 ATG4AQ8WYN0 398 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 BRD8Q9H0E9 1235 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 CNOT10Q9H9A5 744 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 PCDH18Q9HCL0 1135 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 KLC4Q9NSK0 619 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 ZNF148Q9UQR1 794 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 POLHQ9Y253 713 aa8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 R3HDM2Q9Y2K5 976 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-208ENST00000529608 SPTAN1Q13813 2472 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 KIR2DS5A0A0G2JLQ3 304 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 A0A0G2JNG1 304 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 C3orf70A6NLC5 250 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 TTLL8A6PVC2 850 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 KIR2DS3K7RE56 304 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 RIPK2O43353 540 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 GRID2O43424 1007 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 RFPL1O75677 317 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 SORBS2O94875 1100 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 UBXN7O94888 489 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 AGTP01019 485 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 HLA-DQB2P05538 268 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 MMP2P08253 660 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 FGF5P12034 268 aa8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 XRCC1P18887 633 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-208ENST00000529608 MDH1P40925 334 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms