RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZFPM2Q8WW38 1151 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 NRTNQ99748 197 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 CCM2Q9BSQ5 444 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 TRIM4Q9C037 500 aa20.17■□□□□ 0.82
SDCBP-209ENST00000522243 PIKFYVEQ9Y2I7 2098 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 IGLV3-16A0A075B6K0 115 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 C17orf113A0A1B0GUU1 675 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 OR51F1A6NGY5 319 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 NTRK1P04629 796 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 NDUFS1P28331 727 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 PDHA2P29803 388 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 KPNA2P52292 529 aaKnown RBP20.16■□□□□ 0.82
SDCBP-209ENST00000522243 MC1RQ01726 317 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 ACY1Q03154 408 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 CACNG1Q06432 222 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 KCNAB2Q13303 367 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 DBN1Q16643 649 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 PWWP2BQ6NUJ5 590 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 PTRH1Q86Y79 214 aaKnown RBP20.16■□□□□ 0.82
SDCBP-209ENST00000522243 PHC3Q8NDX5 983 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 C1orf54Q8WWF1 131 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 ALS2CR12Q96Q35 445 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 CD180Q99467 661 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 OR52A5Q9H2C5 316 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 ADNPQ9H2P0 1102 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 ETNK1Q9HBU6 452 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 FGF21Q9NSA1 209 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 SMARCAL1Q9NZC9 954 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 HEBP2Q9Y5Z4 205 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 PRSS21Q9Y6M0 314 aa20.16■□□□□ 0.82
SDCBP-209ENST00000522243 GOLGA6L3A6NEY3 463 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 LIASO43766 372 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 IFNB1P01574 187 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 CCNYL3P0C7X3 344 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 ETS1P14921 441 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 PREPP48147 710 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 HSD11B2P80365 405 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 SNX1Q13596 522 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 ERV3-1Q14264 604 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 GPR19Q15760 415 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 CYB5D1Q6P9G0 228 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 LINC00523Q86TU6 105 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 KMT5CQ86Y97 462 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 DNAAF3Q8N9W5 541 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 AKIRIN1Q9H9L7 192 aaPredicted RBP20.15■□□□□ 0.82
SDCBP-209ENST00000522243 LHX9Q9NQ69 397 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 PADI1Q9ULC6 663 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 KALRNO60229 2985 aa20.15■□□□□ 0.82
SDCBP-209ENST00000522243 ZNF462Q96JM2 2506 aa20.14■□□□□ 0.82
SDCBP-209ENST00000522243 MROH6A6NGR9 719 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 GOLGA6L6A8MZA4 724 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 IFRD1O00458 451 aaPredicted RBP20.14■□□□□ 0.81
SDCBP-209ENST00000522243 TERTO14746 1132 aaKnown RBP20.14■□□□□ 0.81
SDCBP-209ENST00000522243 MSNP26038 577 aaKnown RBP20.14■□□□□ 0.81
SDCBP-209ENST00000522243 STIP1P31948 543 aaKnown RBP20.14■□□□□ 0.81
SDCBP-209ENST00000522243 GRIA1P42261 906 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 LMAN1P49257 510 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 PRKAA1Q13131 559 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 OASLQ15646 514 aaKnown RBP20.14■□□□□ 0.81
SDCBP-209ENST00000522243 ZNF658BQ4V348 819 aaPredicted RBP20.14■□□□□ 0.81
SDCBP-209ENST00000522243 SLC13A5Q86YT5 568 aaPredicted RBP20.14■□□□□ 0.81
SDCBP-209ENST00000522243 D2HGDHQ8N465 521 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 ACVR1CQ8NER5 493 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 CT55Q8WUE5 264 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 LCN9Q8WX39 176 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 TSGA10Q9BZW7 698 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 SRMSQ9H3Y6 488 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 VPS37BQ9H9H4 285 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 SOHLH2Q9NX45 425 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 ZNF148Q9UQR1 794 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 PCDHB3Q9Y5E6 796 aa20.14■□□□□ 0.81
SDCBP-209ENST00000522243 GCN1Q92616 2671 aaKnown RBP20.14■□□□□ 0.81
SDCBP-209ENST00000522243 PIEZO2Q9H5I5 2752 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 CCDC162PA2VCL2 907 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 GSAPA4D1B5 854 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 SUV39H1O43463 412 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 KRT86O43790 486 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 ZBTB11O95625 1053 aaPredicted RBP20.13■□□□□ 0.81
SDCBP-209ENST00000522243 FURINP09958 794 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 CDH3P22223 829 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 FOXN2P32314 431 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 CDH17Q12864 832 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 PRKG2Q13237 762 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 DNASE1L3Q13609 305 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 BRD3Q15059 726 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 SKIDA1Q1XH10 827 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 FAM199XQ6PEV8 388 aaPredicted RBP20.13■□□□□ 0.81
SDCBP-209ENST00000522243 NAPRTQ6XQN6 538 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 PPP1R21Q6ZMI0 780 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 OR52E1Q8NGJ3 308 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 RUFY1Q96T51 708 aa20.13■□□□□ 0.81
SDCBP-209ENST00000522243 ZNF71Q9NQZ8 489 aaPredicted RBP20.13■□□□□ 0.81
SDCBP-209ENST00000522243 SLC9B1P1A6NJY1 282 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 E7EVH7 732 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 BTN3A3O00478 584 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 MT-ND3P03897 115 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 FDFT1P37268 417 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 TMTC4Q5T4D3 741 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 ZNF449Q6P9G9 518 aa20.12■□□□□ 0.81
SDCBP-209ENST00000522243 ATG14Q6ZNE5 492 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms