RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PPIL6Q8IXY8 311 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CARFQ8N187 725 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 LILRA3Q8N6C8 439 aaPredicted RBP12.47□□□□□ -0.41
CLCN3-210ENST00000515420 ACVR1CQ8NER5 493 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 USP7Q93009 1102 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CD180Q99467 661 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 CARD6Q9BX69 1037 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
CLCN3-210ENST00000515420 SAMD15Q9P1V8 674 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 RNF14Q9UBS8 474 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 FAM8A1Q9UBU6 413 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 SAR1BQ9Y6B6 198 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 PRSS21Q9Y6M0 314 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 SDK2Q58EX2 2172 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 ZFHX4Q86UP3 3567 aa12.47□□□□□ -0.41
CLCN3-210ENST00000515420 FAM237BA0A1B0GVD1 139 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 SLC5A10A0PJK1 596 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 OR5K3A6NET4 321 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 EFCAB7A8K855 629 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 MATN2O00339 956 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 PRMT5O14744 637 aaPredicted RBP12.46□□□□□ -0.41
CLCN3-210ENST00000515420 PFDN6O15212 129 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 KLK10O43240 276 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 OR1I1O60431 355 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 TYRP1P17643 537 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 ARNTP27540 789 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 NMBRP28336 390 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 TMPRSS3P57727 454 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 CLN3Q13286 438 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 PTK6Q13882 451 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 PPP1R7Q15435 360 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 SNAP47Q5SQN1 464 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 DCAF12Q5T6F0 453 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 RNF187Q5TA31 235 aaPredicted RBP12.46□□□□□ -0.41
CLCN3-210ENST00000515420 ANKRD22Q5VYY1 191 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 MRNIPQ6NTE8 343 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 C19orf48Q6RUI8 117 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 CEACAM20Q6UY09 585 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 SYDE1Q6ZW31 735 aaPredicted RBP12.46□□□□□ -0.41
CLCN3-210ENST00000515420 MICALCLQ6ZW33 695 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 OOSP2Q86WS3 158 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 FAM129CQ86XR2 697 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 DTX1Q86Y01 620 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 KMT5CQ86Y97 462 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 CREG2Q8IUH2 290 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 NAT8LQ8N9F0 302 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 SNRNP27Q8WVK2 155 aaKnown RBP12.46□□□□□ -0.41
CLCN3-210ENST00000515420 KLHL6Q8WZ60 621 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 ELMO1Q92556 727 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 UBXN4Q92575 508 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 ART4Q93070 314 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 MFSD3Q96ES6 412 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 SERPINB12Q96P63 405 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 TGM7Q96PF1 710 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 TCF12Q99081 682 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 PRORYQ9H606 182 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 OCIAD1Q9NX40 245 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 SIDT1Q9NXL6 827 aaKnown RBP12.46□□□□□ -0.41
CLCN3-210ENST00000515420 SLC39A1Q9NY26 324 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 FOXJ2Q9P0K8 574 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 PCDHB11Q9Y5F2 797 aa12.46□□□□□ -0.41
CLCN3-210ENST00000515420 CFAP20Q9Y6A4 193 aaKnown RBP12.46□□□□□ -0.41
CLCN3-210ENST00000515420 NBEAQ8NFP9 2946 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 TLCD2A6NGC4 264 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 SDR42E2A6NKP2 422 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 A8MU76 341 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 STMND1H3BQB6 276 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 CCDC188H7C350 402 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 SMAPO00193 183 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 OGNP20774 298 aaKnown RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 PDHA2P29803 388 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 ADARP55265 1226 aaKnown RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 BOP1Q14137 746 aaKnown RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 KRT33BQ14525 404 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 SEMA3AQ14563 771 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 TYSND1Q2T9J0 566 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 SYTL3Q4VX76 610 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 RNASEH2BQ5TBB1 312 aaKnown RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 IRGCQ6NXR0 463 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 DUS1LQ6P1R4 473 aaKnown RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 PCGF5Q86SE9 256 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 SDCCAG8Q86SQ7 713 aaPredicted RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 TMEM135Q86UB9 458 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 HOOK3Q86VS8 718 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 ASZ1Q8WWH4 475 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 TFGQ92734 400 aaPredicted RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 NAF1Q96HR8 494 aaKnown RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 PANX3Q96QZ0 392 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 DDX47Q9H0S4 455 aaKnown RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 P2RY12Q9H244 342 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 TFB2MQ9H5Q4 396 aaKnown RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 MARCH4Q9P2E8 410 aaPredicted RBP12.45□□□□□ -0.42
CLCN3-210ENST00000515420 KLHL3Q9UH77 587 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 GNPTGQ9UJJ9 305 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 VPS9D1Q9Y2B5 631 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 B3GALT1Q9Y5Z6 326 aa12.45□□□□□ -0.42
CLCN3-210ENST00000515420 H3BMM5 538 aa12.44□□□□□ -0.42
CLCN3-210ENST00000515420 DNALI1O14645 258 aaPredicted RBP12.44□□□□□ -0.42
CLCN3-210ENST00000515420 KPNA5O15131 536 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms