RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CEP85LQ5SZL2 805 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 ABRAXAS1Q6UWZ7 409 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 NAPRTQ6XQN6 538 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 NEK10Q6ZWH5 1172 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 CMC1Q7Z7K0 106 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 OR2I1PQ8NGU4 316 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 RUFY1Q96T51 708 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 OR52A5Q9H2C5 316 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 GPAMQ9HCL2 828 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 PARD6AQ9NPB6 346 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 PCDHGB2Q9Y5G2 931 aa20.55■□□□□ 0.88
LSM6-207ENST00000515311 ARHGEF17Q96PE2 2063 aaPredicted RBP20.55■□□□□ 0.88
LSM6-207ENST00000515311 YY2O15391 372 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 PHGDHO43175 533 aaKnown RBP20.54■□□□□ 0.88
LSM6-207ENST00000515311 ANXA6P08133 673 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 SLC35E2BP0CK96 405 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 F3P13726 295 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 TGM1P22735 817 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 SLC26A3P40879 764 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 ZNF460Q14592 562 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 UAP1L1Q3KQV9 507 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 ACSBG2Q5FVE4 666 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 RAPH1Q70E73 1250 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 PDZD3Q86UT5 571 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 VRK3Q8IV63 474 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 CPNE9Q8IYJ1 553 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 NKAPQ8N5F7 415 aaKnown RBP20.54■□□□□ 0.88
LSM6-207ENST00000515311 PDLIM5Q96HC4 596 aaKnown RBP20.54■□□□□ 0.88
LSM6-207ENST00000515311 PKNOX2Q96KN3 472 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 DOLKQ9UPQ8 538 aa20.54■□□□□ 0.88
LSM6-207ENST00000515311 A0A087X1B8 175 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 PDZK1P1A8MUH7 402 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 MAP2K7O14733 419 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 SNX2O60749 519 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 RFPL1O75677 317 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 MPOP05164 745 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 SLC2A4P14672 509 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 KRT15P19012 456 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 RPL10P27635 214 aaKnown RBP20.53■□□□□ 0.88
LSM6-207ENST00000515311 PDHA2P29803 388 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 HALP42357 657 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 MAPK9P45984 424 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 PGGT1BP53609 377 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 TAF1BQ53T94 588 aaPredicted RBP20.53■□□□□ 0.88
LSM6-207ENST00000515311 CAPRIN2Q6IMN6 1127 aaKnown RBP20.53■□□□□ 0.88
LSM6-207ENST00000515311 TMEM207Q6UWW9 146 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 PRR23CQ6ZRP0 262 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 CYP4X1Q8N118 509 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 FAM46DQ8NEK8 389 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 ACMSDQ8TDX5 336 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 PGM2Q96G03 612 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 UBXN10Q96LJ8 280 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 EDEM2Q9BV94 578 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 WWP1Q9H0M0 922 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 PRDM8Q9NQV8 689 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 NLGN3Q9NZ94 848 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 TLK1Q9UKI8 766 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 ACOT9Q9Y305 439 aa20.53■□□□□ 0.88
LSM6-207ENST00000515311 A0A096LPK6 155 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 OR5K4A6NMS3 321 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 EML2O95834 649 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 TSPAN12O95859 305 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 MT-ND3P03897 115 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 C2P06681 752 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 GIMD1P0DJR0 217 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 MPC1LP0DKB6 136 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 BRAFP15056 766 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 SEPT7Q16181 437 aaKnown RBP20.52■□□□□ 0.88
LSM6-207ENST00000515311 EEF1AKMT1Q8WVE0 214 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 LINGO1Q96FE5 620 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 CABS1Q96KC9 395 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 RMDN2Q96LZ7 410 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 PHOX2BQ99453 314 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 DUSP23Q9BVJ7 150 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 TMEM9BQ9NQ34 198 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 ZNF446Q9NWS9 450 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 PSMD13Q9UNM6 376 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 WDR37Q9Y2I8 494 aa20.52■□□□□ 0.88
LSM6-207ENST00000515311 ZNF292O60281 2723 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 KIR2DS5A0A0G2JLQ3 304 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 A0A0G2JNG1 304 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 GOLGA6L10A6NI86 522 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 KIR2DS3K7RE56 304 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 IFRD1O00458 451 aaPredicted RBP20.51■□□□□ 0.87
LSM6-207ENST00000515311 CDX4O14627 284 aaPredicted RBP20.51■□□□□ 0.87
LSM6-207ENST00000515311 RGS16O15492 202 aaPredicted RBP20.51■□□□□ 0.87
LSM6-207ENST00000515311 MYZAPP0CAP1 466 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 ALPPL2P10696 532 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 ACADLP28330 430 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 SLC14A1Q13336 389 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 KIR2DS5Q14953 304 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 SUZ12Q15022 739 aaKnown RBP20.51■□□□□ 0.87
LSM6-207ENST00000515311 DEFB133Q30KQ1 61 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 C6orf132Q5T0Z8 1188 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 IYDQ6PHW0 289 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 OGFOD3Q6PK18 319 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 ASCL5Q7RTU5 278 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 TBC1D1Q86TI0 1168 aaPredicted RBP20.51■□□□□ 0.87
LSM6-207ENST00000515311 GATAD2AQ86YP4 633 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 MYO1HQ8N1T3 1032 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms