RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TGFB3P10600 412 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 CPT2P23786 658 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 MARK3P27448 753 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 MATR3P43243 847 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 PSMC4P43686 418 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 FMO5P49326 533 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 GAS1P54826 345 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 MLLT10P55197 1068 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 ARL16Q0P5N6 197 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 CRY2Q49AN0 593 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF628Q5EBL2 1059 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 FAM76BQ5HYJ3 339 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 DGLUCYQ7Z3D6 616 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 TMEM173Q86WV6 379 aaPredicted RBP4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 L3MBTL4Q8NA19 623 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 PAPD5Q8NDF8 572 aaKnown RBP4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 TSPAN14Q8NG11 270 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 OR13A1Q8NGR1 328 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 NXNL1Q96CM4 212 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 FKRPQ9H9S5 495 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 PRMT7Q9NVM4 692 aaPredicted RBP4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 GIMAP2Q9UG22 337 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 LRP12Q9Y561 859 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 TMEM221A6NGB7 291 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 KRTAP29-1A8MX34 341 aaPredicted RBP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 DKC1O60832 514 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 C22orf31O95567 290 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 F7P08709 466 aaPredicted RBP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 THOP1P52888 689 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 DLX5P56178 289 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 NR1D2Q14995 579 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 DUOXA1Q1HG43 343 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF718Q3SXZ3 478 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF672Q499Z4 452 aaPredicted RBP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 KLHL26Q53HC5 615 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 RBPMS2Q6ZRY4 209 aaKnown RBP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 ANO5Q75V66 913 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 EXOC3L1Q86VI1 746 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 FAM114A1Q8IWE2 563 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 MAB21L3Q8N8X9 362 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 RDM1Q8NG50 284 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 OR6J1Q8NGC5 347 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 SECISBP2LQ93073 1101 aaKnown RBP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 RADILQ96JH8 1075 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 LMLNQ96KR4 655 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF583Q96ND8 569 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 FNDC11Q9BVV2 318 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 OR10A4Q9H209 315 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 ST6GALNAC4Q9H4F1 302 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 ANKZF1Q9H8Y5 726 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 PELI2Q9HAT8 420 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 CCDC177Q9NQR7 707 aaPredicted RBP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 BCCIPQ9P287 314 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 KCNG2Q9UJ96 466 aa4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGCS1-207ENST00000514610 SOS1Q07889 1333 aaPredicted RBP4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 IGLV5-45A0A087WSX0 123 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 A0A1W2PPI3 338 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 ELOVL7A1L3X0 281 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 A8MXE2 369 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 DANCRP0C864 163 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 MYBL1P10243 752 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 PFKFB1P16118 471 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 CKMT2P17540 419 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 AMD1P17707 334 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 KIR2DS3Q14952 304 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 DCP1BQ8IZD4 617 aaKnown RBP4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 XXYLT1Q8NBI6 393 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 SLC24A4Q8NFF2 622 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 OR5M8Q8NGP6 311 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 MOSPD2Q8NHP6 518 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 MTERF3Q96E29 417 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 ALG14Q96F25 216 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 CNOT10Q9H9A5 744 aaKnown RBP4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 ACKR4Q9NPB9 350 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 PTTG2Q9NZH5 202 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 TUBE1Q9UJT0 475 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 PROCRQ9UNN8 238 aa4.83□□□□□ -1.64
HMGCS1-207ENST00000514610 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 EDDM13A0A1B0GTR0 161 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 LINGO3P0C6S8 592 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 OR2T7P0C7T2 308 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 CETPP11597 493 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 CSE1LP55060 971 aaKnown RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 TPD52P55327 224 aaPredicted RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 RPL36AP83881 106 aaKnown RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 RALGDSQ12967 914 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 GAGE5Q13069 117 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 GAGE6Q13070 117 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 MFAP5Q13361 173 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 ZRSR1Q15695 479 aaKnown RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 PDSS1Q5T2R2 415 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 TMPRSS11FQ6ZWK6 438 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 NFE4Q86UQ8 179 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 CPSF7Q8N684 471 aaKnown RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 SPDL1Q96EA4 605 aa4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 CNDP2Q96KP4 475 aaKnown RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 BAG1Q99933 345 aaPredicted RBP4.82□□□□□ -1.64
HMGCS1-207ENST00000514610 RABEP2Q9H5N1 569 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms