RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TOR4AQ9NXH8 423 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 DLL3Q9NYJ7 618 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 CIDEBQ9UHD4 219 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 PADI4Q9UM07 663 aa9.59□□□□□ -0.87
TOPBP1-209ENST00000513818 GOLGA4Q13439 2230 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 FAM95CA0A1B0GW59 222 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC5A10A0PJK1 596 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 PPM1DO15297 605 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 RIPK2O43353 540 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 TNFSF14O43557 240 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 KCNK5O95279 499 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 GSTA2P09210 222 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 FTH1P19P0C7X4 201 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CKMT1AP12532 417 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CKMT2P17540 419 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CSRP1P21291 193 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 MCM3P25205 808 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 AOAHP28039 575 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 HALP42357 657 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 MAPK9P45984 424 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 BDKRB1P46663 353 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 PPM1FP49593 454 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CLCN7P51798 805 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 UBE2IP63279 158 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 TIAL1Q01085 375 aaKnown RBP eCLIP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 HHEXQ03014 270 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 TMED2Q15363 201 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 RPE65Q16518 533 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 HECTD2Q5U5R9 776 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 IYDQ6PHW0 289 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 OGFOD3Q6PK18 319 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 ABRAXAS1Q6UWZ7 409 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 DHRS13Q6UX07 377 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CCNI2Q6ZMN8 369 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 KIAA0408Q6ZU52 694 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CEP128Q6ZU80 1094 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 OTOAQ7RTW8 1153 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 SLCO6A1Q86UG4 719 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 PDZD3Q86UT5 571 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC26A11Q86WA9 606 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 ZC3HC1Q86WB0 502 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 RELL1Q8IUW5 271 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 TRIM48Q8IWZ4 208 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 PHC3Q8NDX5 983 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CFAP61Q8NHU2 1237 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CD200R1Q8TD46 325 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 SKA2Q8WVK7 121 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 TMEM159Q96B96 161 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CXorf40BQ96DE9 158 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 VPS39Q96JC1 886 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 PANX3Q96QZ0 392 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CDC6Q99741 560 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CCDC3Q9BQI4 270 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 HGH1Q9BTY7 390 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 TSSK1BQ9BXA7 367 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 TBC1D10AQ9BXI6 508 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 PARD6BQ9BYG5 372 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 LRIT1Q9P2V4 623 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CPNE7Q9UBL6 633 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 PLAGL1Q9UM63 463 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 CDYLQ9Y232 598 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 VPS9D1Q9Y2B5 631 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 NFS1Q9Y697 457 aa9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 DNMT3AQ9Y6K1 912 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-209ENST00000513818 COL27A1Q8IZC6 1860 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 C17orf113A0A1B0GUU1 675 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 EME2A4GXA9 379 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 RHPN2P1A8MT19 583 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 POC1B-GALNT4F8VUJ3 575 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 H3BMM5 538 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 AGRPO00253 132 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 LIN7AO14910 233 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 PHGDHO43175 533 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 VPS26AO75436 327 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 GPC4O75487 556 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 SPAG6O75602 509 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 RFPL3O75679 317 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 VIPP01282 170 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 APOA4P06727 396 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 NUDT7P0C024 238 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 MTHFD1P11586 935 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 FDXRP22570 491 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 VAMP1P23763 118 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 PHBP35232 272 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 GP5P40197 560 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 RPIAP49247 311 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 ADARP55265 1226 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 OR1D5P58170 312 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 ABRQ12979 859 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 PRKG2Q13237 762 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 SLMAPQ14BN4 828 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 AMZ1Q400G9 498 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 PPM1JQ5JR12 505 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 AGAP9Q5VTM2 703 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 NKAIN2Q5VXU1 208 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 CAPRIN2Q6IMN6 1127 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 PIWIL4Q7Z3Z4 852 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 C17orf82Q86X59 251 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 MARCH9Q86YJ5 346 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC22A15Q8IZD6 547 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms