RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SEMA5BQ9P283 1151 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 RNF14Q9UBS8 474 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 FAM8A1Q9UBU6 413 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 SOX13Q9UN79 622 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 PRMT5O14744 637 aaPredicted RBP19.39■□□□□ 0.69
SFXN1-209ENST00000508290 CD3EAPO15446 510 aaKnown RBP19.39■□□□□ 0.69
SFXN1-209ENST00000508290 RASSF9O75901 435 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 VPS41P49754 854 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 ATP1A2P50993 1020 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 GFERP55789 205 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 VAC14Q08AM6 782 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 IL11RAQ14626 422 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 TRIP13Q15645 432 aaPredicted RBP19.39■□□□□ 0.69
SFXN1-209ENST00000508290 SYTL3Q4VX76 610 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 PAPD7Q5XG87 772 aaKnown RBP19.39■□□□□ 0.69
SFXN1-209ENST00000508290 SDCCAG8Q86SQ7 713 aaPredicted RBP19.39■□□□□ 0.69
SFXN1-209ENST00000508290 SPDYE1Q8NFV5 336 aaPredicted RBP19.39■□□□□ 0.69
SFXN1-209ENST00000508290 KLHL6Q8WZ60 621 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 ELMO1Q92556 727 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 TCF12Q99081 682 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 CARD6Q9BX69 1037 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 OCIAD1Q9NX40 245 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 FOXJ2Q9P0K8 574 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 SAMD15Q9P1V8 674 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 KLHL3Q9UH77 587 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 VPS9D1Q9Y2B5 631 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 NEU2Q9Y3R4 380 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 LAMA5O15230 3695 aa19.39■□□□□ 0.69
SFXN1-209ENST00000508290 KPNA5O15131 536 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 POLR1CO15160 346 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 MGAT1P26572 445 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 ADAMTS20P59510 1910 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 PRKAA1Q13131 559 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 PPP1R7Q15435 360 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 CACHD1Q5VU97 1274 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 KIAA0930Q6ICG6 404 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 IRGCQ6NXR0 463 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 SYDE1Q6ZW31 735 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 PCGF5Q86SE9 256 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 BPHLQ86WA6 291 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 ASZ1Q8WWH4 475 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 CPT1BQ92523 772 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 TFGQ92734 400 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 PANX3Q96QZ0 392 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 NAPGQ99747 312 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 TRIT1Q9H3H1 467 aaKnown RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 TFB2MQ9H5Q4 396 aaKnown RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 HRASLS2Q9NWW9 162 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 SIDT1Q9NXL6 827 aaKnown RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 POLG2Q9UHN1 485 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 CFAP20Q9Y6A4 193 aaKnown RBP19.38■□□□□ 0.69
SFXN1-209ENST00000508290 SAR1BQ9Y6B6 198 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 CELSR3Q9NYQ7 3312 aa19.38■□□□□ 0.69
SFXN1-209ENST00000508290 ZFHX4Q86UP3 3567 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 CTAGE9A4FU28 777 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 TLCD2A6NGC4 264 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 SDR42E2A6NKP2 422 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 CXADRP78310 365 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 CRADDP78560 199 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 BOP1Q14137 746 aaKnown RBP19.37■□□□□ 0.69
SFXN1-209ENST00000508290 TMED2Q15363 201 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 DNTTIP2Q5QJE6 756 aaKnown RBP19.37■□□□□ 0.69
SFXN1-209ENST00000508290 CCDC81Q6ZN84 652 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 PPIL6Q8IXY8 311 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 LILRA3Q8N6C8 439 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-209ENST00000508290 LSM14AQ8ND56 463 aaKnown RBP19.37■□□□□ 0.69
SFXN1-209ENST00000508290 NAT14Q8WUY8 206 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 FERD3LQ96RJ6 166 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 UBL7Q96S82 380 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-209ENST00000508290 SYBUQ9NX95 663 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 PCYOX1Q9UHG3 505 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 GNPTGQ9UJJ9 305 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 B3GALT1Q9Y5Z6 326 aa19.37■□□□□ 0.69
SFXN1-209ENST00000508290 CFAP47Q6ZTR5 3102 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 FAM237BA0A1B0GVD1 139 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 TCRBV7S3A2A0A539 114 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 SLC5A10A0PJK1 596 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 USP27XA6NNY8 438 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 H3BMM5 538 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 K7ENP7 123 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 NDUFS3O75489 264 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 RPN2P04844 631 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 APOA4P06727 396 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 NELFEP18615 380 aaKnown RBP19.36■□□□□ 0.69
SFXN1-209ENST00000508290 RPS3P23396 243 aaKnown RBP eCLIP19.36■□□□□ 0.692e-6■□□□□ 9.4
SFXN1-209ENST00000508290 NMBRP28336 390 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 LEPRP48357 1165 aaKnown RBP19.36■□□□□ 0.69
SFXN1-209ENST00000508290 ADARP55265 1226 aaKnown RBP19.36■□□□□ 0.69
SFXN1-209ENST00000508290 ANKS6Q68DC2 871 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 DUS1LQ6P1R4 473 aaKnown RBP19.36■□□□□ 0.69
SFXN1-209ENST00000508290 CASC4Q6P4E1 433 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 INO80CQ6PI98 192 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-209ENST00000508290 CAND1Q86VP6 1230 aaKnown RBP19.36■□□□□ 0.69
SFXN1-209ENST00000508290 LMNTD2Q8IXW0 634 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 TBC1D21Q8IYX1 336 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 LCN9Q8WX39 176 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 SLC41A2Q96JW4 573 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 SRMSQ9H3Y6 488 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 KCND1Q9NSA2 647 aa19.36■□□□□ 0.69
SFXN1-209ENST00000508290 MRFAP1Q9Y605 127 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms