RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 IL1R2P27930 398 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 MIPP30301 263 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 HNRNPH3P31942 346 aaKnown RBP5.84□□□□□ -1.47
GYPB-204ENST00000504951 PBX1P40424 430 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ARL4DP49703 201 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 SMSP52788 366 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 CDH6P55285 790 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 KRTAP10-9P60411 292 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 MAXP61244 160 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 UBXN1Q04323 297 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 DPYSQ14117 519 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 KCNAB1Q14722 419 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 LONRF1Q17RB8 773 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 FAM182AQ5T1J6 154 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 FKBP15Q5T1M5 1219 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ERMARDQ5T6L9 678 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 MARC1Q5VT66 337 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 AGAP7PQ5VUJ5 663 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 E4F1Q66K89 784 aaPredicted RBP5.84□□□□□ -1.47
GYPB-204ENST00000504951 TXNRD3NBQ6F5E7 133 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 PLEKHA7Q6IQ23 1121 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 DCUN1D2Q6PH85 259 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 FAM180AQ6UWF9 173 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 C11orf96Q7Z7L8 435 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ADGRG6Q86SQ4 1221 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 LRRTM4Q86VH4 590 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 TGIF2LYQ8IUE0 185 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ZNF547Q8IVP9 402 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 SYTL1Q8IYJ3 562 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 PAF1Q8N7H5 531 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 NEK11Q8NG66 645 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 SPATA3Q8NHX4 192 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 DNAJB14Q8TBM8 379 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 PROKR1Q8TCW9 393 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 BRSK1Q8TDC3 778 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 NR4A3Q92570 626 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 NINJ1Q92982 152 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 CXorf40BQ96DE9 158 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 RNF31Q96EP0 1072 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 AGAP4Q96P64 663 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 TRAPPC9Q96Q05 1148 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ERGIC2Q96RQ1 377 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ZSCAN5AQ9BUG6 496 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ACTR5Q9H9F9 607 aaPredicted RBP5.84□□□□□ -1.47
GYPB-204ENST00000504951 FANCEQ9HB96 536 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ZBTB20Q9HC78 741 aaPredicted RBP5.84□□□□□ -1.47
GYPB-204ENST00000504951 LMBRD1Q9NUN5 540 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 OLAHQ9NV23 265 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 GOLGA6AQ9NYA3 693 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 PKD2L2Q9NZM6 624 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 ABI3Q9P2A4 366 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 TNFRSF10DQ9UBN6 386 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 LIMA1Q9UHB6 759 aaKnown RBP5.84□□□□□ -1.47
GYPB-204ENST00000504951 CD84Q9UIB8 345 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 GDF2Q9UK05 429 aaPredicted RBP5.84□□□□□ -1.47
GYPB-204ENST00000504951 PRKAB1Q9Y478 270 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 AP1M2Q9Y6Q5 423 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 SPTBP11277 2137 aa5.84□□□□□ -1.47
GYPB-204ENST00000504951 DOCK10Q96BY6 2186 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 UBA6A0AVT1 1052 aaPredicted RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 ANKRD62A6NC57 917 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 LRRC10BA6NIK2 292 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 ANKRD66B4E2M5 251 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 H3BMH7 237 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 DAPK3O43293 454 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 PRPSAP2O60256 369 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 MTA2O94776 668 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 ZRANB2O95218 330 aaKnown RBP eCLIP5.83□□□□□ -1.48
GYPB-204ENST00000504951 SLC25A14O95258 325 aaPredicted RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 CLDN7O95471 211 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 CLDN14O95500 239 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 PYGMP11217 842 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 DESP17661 470 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 CA4P22748 312 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 MMP11P24347 488 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 HALP42357 657 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 ABRQ12979 859 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 CDC16Q13042 620 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 ANKRD20A8PQ5CZ79 823 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 CT47A1Q5JQC4 288 aaPredicted RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 DNTTIP2Q5QJE6 756 aaKnown RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 PRAMEF13Q5VWM6 474 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 HGSNATQ68CP4 663 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 RHBDD2Q6NTF9 364 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 Q6ZPB1 254 aaPredicted RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 RBM43Q6ZSC3 357 aaKnown RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 PPP1R32Q7Z5V6 425 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 TRAM1L1Q8N609 369 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 CHDHQ8NE62 594 aaPredicted RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 CCHCR1Q8TD31 782 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 NSMCE1Q8WV22 266 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 HAS2Q92819 552 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 GLYATL1Q969I3 302 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 MTFMTQ96DP5 389 aaKnown RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 VPS50Q96JG6 964 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 VPS35Q96QK1 796 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 MLPHQ9BV36 600 aaPredicted RBP5.83□□□□□ -1.48
GYPB-204ENST00000504951 AP1M1Q9BXS5 423 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 PITPNM3Q9BZ71 974 aa5.83□□□□□ -1.48
GYPB-204ENST00000504951 DLL4Q9NR61 685 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms