RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CRTC3Q6UUV7 619 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 MBOAT1Q6ZNC8 495 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 FRMD7Q6ZUT3 714 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 ADAMTSL2Q86TH1 951 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 MAML2Q8IZL2 1156 aaPredicted RBP10.18□□□□□ -0.78
TPM3-217ENST00000504663 CAMKK1Q8N5S9 505 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 OR2L2Q8NH16 312 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 STAG3L4Q8TBR4 150 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 HM13Q8TCT9 377 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 ZNF483Q8TF39 744 aaPredicted RBP10.18□□□□□ -0.78
TPM3-217ENST00000504663 UBTD2Q8WUN7 234 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 C10orf82Q8WW14 230 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 ASB11Q8WXH4 323 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 OR1E3Q8WZA6 343 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 EDAQ92838 391 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 PDXPQ96GD0 296 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 TSNARE1Q96NA8 513 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 IER2Q9BTL4 223 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 TSSK1BQ9BXA7 367 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 GPR174Q9BXC1 333 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 PITPNM3Q9BZ71 974 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 ZCCHC2Q9C0B9 1178 aaKnown RBP10.18□□□□□ -0.78
TPM3-217ENST00000504663 DRC3Q9H069 523 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 OR52A5Q9H2C5 316 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 RDH14Q9HBH5 336 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 NUDT4Q9NZJ9 180 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 PDE10AQ9Y233 779 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.18□□□□□ -0.78
TPM3-217ENST00000504663 SIT1Q9Y3P8 196 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 PRKAB1Q9Y478 270 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 PLEKHM1Q9Y4G2 1056 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 USP34Q70CQ2 3546 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 CACNA1IQ9P0X4 2223 aa10.18□□□□□ -0.78
TPM3-217ENST00000504663 MGAT4DA6NG13 374 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 ARHGEF33A8MVX0 844 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 GPR89AB7ZAQ6 455 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 F8W8V4 182 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 STX16-NPEPL1H3BU86 382 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 STX16O14662 325 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 LIN7AO14910 233 aaPredicted RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 NPHS1O60500 1241 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 ZNF217O75362 1048 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 PSIP1O75475 530 aaKnown RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 VIMP08670 466 aaKnown RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 GPR89BP0CG08 455 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 ALOX15P16050 662 aaPredicted RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 AOC1P19801 751 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 GRK2P25098 689 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 PBLDP30039 288 aaPredicted RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 OXTRP30559 389 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 SLC1A6P48664 564 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 RGS4P49798 205 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 AGTR2P50052 363 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 NAGLUP54802 743 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 ABCE1P61221 599 aaKnown RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 HSPA14Q0VDF9 509 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 OVGP1Q12889 678 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 STX3Q13277 289 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 SP140Q13342 867 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 GRB7Q14451 532 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 SETDB1Q15047 1291 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 CCSMST1Q4G0I0 132 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 PYCR3Q53H96 274 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 FBXO48Q5FWF7 155 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 FOXR1Q6PIV2 292 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 LRRTM4Q86VH4 590 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 TRAPPC5Q8IUR0 188 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 TRIM42Q8IWZ5 723 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 MYO1HQ8N1T3 1032 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 RFWD2Q8NHY2 731 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 C1orf216Q8TAB5 229 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 BCAS4Q8TDM0 211 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 EXT2Q93063 718 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 ZNF514Q96K75 400 aaPredicted RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 RMDN2Q96LZ7 410 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 NSUN5Q96P11 429 aaKnown RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 TIMM29Q9BSF4 260 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 C1QTNF7Q9BXJ2 289 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 SLC12A9Q9BXP2 914 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 ZDHHC5Q9C0B5 715 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 ZBTB26Q9HCK0 441 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 MRPL40Q9NQ50 206 aaKnown RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 PHPT1Q9NRX4 125 aaPredicted RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 THAP1Q9NVV9 213 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 ZNF225Q9UK10 706 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 PTBP2Q9UKA9 531 aaKnown RBP10.17□□□□□ -0.78
TPM3-217ENST00000504663 PCTPQ9UKL6 214 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 RNF112Q9ULX5 631 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 HS3ST3A1Q9Y663 406 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 FANCMQ8IYD8 2048 aa10.17□□□□□ -0.78
TPM3-217ENST00000504663 NCOR1O75376 2440 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 A0A1W2PPC4 97 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 A0A1W2PR77 199 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 PPP6CO00743 305 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 SLC16A5O15375 505 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 FFAR2O15552 330 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 GRID2O43424 1007 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 H2AFYO75367 372 aaKnown RBP10.16□□□□□ -0.78
TPM3-217ENST00000504663 TGDSO95455 350 aa10.16□□□□□ -0.78
TPM3-217ENST00000504663 WNT1P04628 370 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms