RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, human

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCG5-209	ENST00000498607	ATP1A2	P50993	1020 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	SRP54	P61011	504 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	HSPA14	Q0VDF9	509 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	EIF2B5	Q13144	721 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	RPA4	Q13156	261 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	FZD2	Q14332	565 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	ACAP2	Q15057	778 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	SEPT7	Q16181	437 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	PLA2G4E	Q3MJ16	856 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	CCDC153	Q494R4	210 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	TECRL	Q5HYJ1	363 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	C16orf46	Q6P387	395 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	XKR5	Q6UX68	686 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	NAPRT	Q6XQN6	538 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	CEP68	Q76N32	757 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	SLC22A15	Q8IZD6	547 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	SPATA6L	Q8N4H0	392 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	MDM1	Q8TC05	714 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	RDH11	Q8TC12	318 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	TSACC	Q96A04	125 aa	Predicted RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	KIAA1191	Q96A73	305 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	PTER	Q96BW5	349 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	MRPL57	Q9BQC6	102 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	UNK	Q9C0B0	810 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	MRPL46	Q9H2W6	279 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	C12orf65	Q9H3J6	166 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	TFB2M	Q9H5Q4	396 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	CARS2	Q9HA77	564 aa	Known RBP	11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	SLC23A2	Q9UGH3	650 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	PCDHGA2	Q9Y5H1	932 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	DGKB	Q9Y6T7	804 aa		11.43	□□□□□ -0.58
SCG5-209	ENST00000498607	SDK1	Q7Z5N4	2213 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	NPEPPSL1	A6NEC2	478 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	PRR19	A6NJB7	356 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	PRR5-ARHGAP8	B1AHC4	643 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	TLR4	O00206	839 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	BTN3A1	O00481	513 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	VILL	O15195	856 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	RASGRP1	O95267	797 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	DHRS4L1	P0CG22	281 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	ACP5	P13686	325 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	CHN1	P15882	459 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	ITPKA	P23677	461 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	MAPK9	P45984	424 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	PREP	P48147	710 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	CLCNKA	P51800	687 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	AFF3	P51826	1226 aa	Known RBP	11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	WDR4	P57081	412 aa	Known RBP	11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	PPARD	Q03181	441 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	LRP8	Q14114	963 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	NFE2L1	Q14494	772 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	TEAD4	Q15561	434 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	HHAT	Q5VTY9	493 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	LVRN	Q6Q4G3	990 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	CYHR1	Q6ZMK1	362 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	ADAMTSL2	Q86TH1	951 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	ISCA2	Q86U28	154 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	PARG	Q86W56	976 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	HID1	Q8IV36	788 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	VRK3	Q8IV63	474 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	CFAP206	Q8IYR0	622 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	FSTL5	Q8N475	847 aa	Predicted RBP	11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	ARMC2	Q8NEN0	867 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	RHEBL1	Q8TAI7	183 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	MGARP	Q8TDB4	240 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	SKA1	Q96BD8	255 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	ZC3H10	Q96K80	434 aa	Known RBP	11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	DPEP2	Q9H4A9	486 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	ALG9	Q9H6U8	611 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	TM7SF3	Q9NS93	570 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	INTS9	Q9NV88	658 aa	Known RBP	11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	XPR1	Q9UBH6	696 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	SUSD2	Q9UGT4	822 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	TSR3	Q9UJK0	312 aa	Known RBP	11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	GPSM3	Q9Y4H4	160 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	CACNA1E	Q15878	2313 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	ANKRD12	Q6UB98	2062 aa		11.42	□□□□□ -0.58
SCG5-209	ENST00000498607	PI4KA	P42356	2102 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	KNL1	Q8NG31	2342 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607		A0A1B0GTW7	788 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	TARM1	B6A8C7	271 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607		H3BM21	787 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	CDC7	O00311	574 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	POLR3G	O15318	223 aa	Predicted RBP	11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	KERA	O60938	352 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	TNF	P01375	233 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	C8G	P07360	202 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	GNS	P15586	552 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	HOXD12	P35452	270 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	DPP6	P42658	865 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	BLK	P51451	505 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	HK3	P52790	923 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	NXPH1	P58417	271 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	IRX4	P78413	519 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	SP140	Q13342	867 aa		11.41	□□□□□ -0.58
SCG5-209	ENST00000498607	OR4D1	Q15615	310 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms