RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 KCNE4Q8WWG9 221 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 RSC1A1Q92681 617 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 TFGQ92734 400 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 ZNF669Q96BR6 464 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 SIGLEC10Q96LC7 697 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 C9orf72Q96LT7 481 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 TAAR9Q96RI9 348 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 TCF12Q99081 682 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 RAB33BQ9H082 229 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 HRASLS2Q9NWW9 162 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 OCIAD1Q9NX40 245 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 SLC39A1Q9NY26 324 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 EPHA6Q9UF33 1036 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 SLC24A2Q9UI40 661 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 KIF26BQ2KJY2 2108 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 MN1Q10571 1320 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-213ENST00000498495 UBA6A0AVT1 1052 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-213ENST00000498495 SLC5A10A0PJK1 596 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 IQCF5A8MTL0 148 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 FANCGO15287 622 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 TOX3O15405 576 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-213ENST00000498495 RASSF9O75901 435 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 KRT37O76014 449 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 ARNTP27540 789 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 ITPKBP27987 946 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 ABCG1P45844 678 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 CAPZBP47756 277 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 LEPRP48357 1165 aaKnown RBP12.48□□□□□ -0.41
HSPG2-213ENST00000498495 ARCN1P48444 511 aaKnown RBP12.48□□□□□ -0.41
HSPG2-213ENST00000498495 CSE1LP55060 971 aaKnown RBP12.48□□□□□ -0.41
HSPG2-213ENST00000498495 HSPA14Q0VDF9 509 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 THOC5Q13769 683 aaKnown RBP12.48□□□□□ -0.41
HSPG2-213ENST00000498495 CACHD1Q5VU97 1274 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 NEPROQ6NW34 567 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 ARMC6Q6NXE6 501 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 FAM92BQ6ZTR7 304 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 HOOK3Q86VS8 718 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 OOSP2Q86WS3 158 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 LRRC6Q86X45 466 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 ACVR1CQ8NER5 493 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 OR4E2Q8NGC2 313 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 ASZ1Q8WWH4 475 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 FCRL3Q96P31 734 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-213ENST00000498495 PANX3Q96QZ0 392 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 KRT12Q99456 494 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 DPH1Q9BZG8 443 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 B3GNT4Q9C0J1 378 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 KIR3DX1Q9H7L2 352 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 MVB12BQ9H7P6 319 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 WDR70Q9NW82 654 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 GNPTGQ9UJJ9 305 aa12.48□□□□□ -0.41
HSPG2-213ENST00000498495 OR6C74A6NCV1 312 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 OR5K3A6NET4 321 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 B4E171 279 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 C9orf172C9J069 976 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 SMAPO00193 183 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 KPNA5O15131 536 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 TTI1O43156 1089 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 KLK10O43240 276 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 PRAMEF10O60809 474 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 USP1O94782 785 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 APOA4P06727 396 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 OGNP20774 298 aaKnown RBP12.47□□□□□ -0.41
HSPG2-213ENST00000498495 RPS3P23396 243 aaKnown RBP eCLIP12.47□□□□□ -0.41
HSPG2-213ENST00000498495 IVDP26440 423 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 FMO4P31512 558 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 CCR7P32248 378 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 TSPAN7P41732 249 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 MAGEA3P43357 314 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 SEPHS1P49903 392 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 EIF3BP55884 814 aaKnown RBP12.47□□□□□ -0.41
HSPG2-213ENST00000498495 PRKAA1Q13131 559 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 PRKG2Q13237 762 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 DCAF12Q5T6F0 453 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 RNF187Q5TA31 235 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-213ENST00000498495 BROXQ5VW32 411 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 PDZD3Q86UT5 571 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 SPACA3Q8IXA5 215 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 KRT222Q8N1A0 295 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 LCN9Q8WX39 176 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 ART4Q93070 314 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 STAMBPL1Q96FJ0 436 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 TRIM56Q9BRZ2 755 aaKnown RBP12.47□□□□□ -0.41
HSPG2-213ENST00000498495 ASPSCR1Q9BZE9 553 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 P2RY12Q9H244 342 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 SRMSQ9H3Y6 488 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 ASF1AQ9Y294 204 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 CRYL1Q9Y2S2 319 aa12.47□□□□□ -0.41
HSPG2-213ENST00000498495 URB1O60287 2271 aaKnown RBP12.47□□□□□ -0.41
HSPG2-213ENST00000498495 ZCWPW2A0A1B0GU75 182 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 EFCAB8A8MWE9 144 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 BHMG1C9JSJ3 638 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-213ENST00000498495 KIF1CO43896 1103 aaKnown RBP12.46□□□□□ -0.41
HSPG2-213ENST00000498495 ANKRD34CP0C6C1 535 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 POLR2CP19387 275 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-213ENST00000498495 CD82P27701 267 aa12.46□□□□□ -0.41
HSPG2-213ENST00000498495 ACADLP28330 430 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms