RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TAF5Q15542 800 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MAPKAPK3Q16644 382 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 HSP90AA4PQ58FG1 418 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 WASHC2DQ5SRD0 308 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 BSPRYQ5W0U4 402 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 IL31Q6EBC2 164 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PWWP2BQ6NUJ5 590 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GSTA5Q7RTV2 222 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TAS1R1Q7RTX1 841 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GOLGA7Q7Z5G4 137 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TMEM179BQ7Z7N9 219 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ACOT1Q86TX2 421 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CACUL1Q86Y37 369 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 RBM45Q8IUH3 476 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 PHC2Q8IXK0 858 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CEP120Q8N960 986 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DNERQ8NFT8 737 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 OR4K1Q8NGD4 311 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 LILRB4Q8NHJ6 448 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GSDMBQ8TAX9 411 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 U2AF1L4Q8WU68 220 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 TM4SF19Q96DZ7 209 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SAT2Q96F10 170 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 ANKRD36BP1Q96IX9 119 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 AKR1E2Q96JD6 320 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 BTN2A3PQ96KV6 586 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZNF570Q96NI8 536 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TSNAXQ99598 290 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 TSG101Q99816 390 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 VRK1Q99986 396 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 C20orf144Q9BQM9 153 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 HGH1Q9BTY7 390 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SSBP4Q9BWG4 385 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 PDE7BQ9NP56 450 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 NLE1Q9NVX2 485 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 MUTYHQ9UIF7 546 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 EIF3LQ9Y262 564 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 COL5A2P05997 1499 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 MED13LQ71F56 2210 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3DA0A087WVF3 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3IA0A087WXS9 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3EA0A087X179 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3KA0A087X1G2 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 A0A1W2PRG6 482 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3BA6NDS4 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3FA6NER0 549 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 C1orf196B1AJZ1 125 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3LB9A6J9 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 H3BQV1 296 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PSMD14O00487 310 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 COPEO14579 308 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TM4SF5O14894 197 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 EPB41L2O43491 1005 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 KCNQ3O43525 872 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TLR5O60602 858 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PEX11BO96011 259 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3HP0C7X1 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CYP11B1P15538 503 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ATF6P18850 670 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TFE3P19532 575 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 GNLYP22749 145 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 F8A1P23610 371 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PSMA3P25788 255 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DEKP35659 375 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 KRT20P35900 424 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DLSTP36957 453 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ALDH9A1P49189 494 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZNF75DP51815 510 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TAS2R46P59540 309 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CCZ1BP86790 482 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CCZ1P86791 482 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 SETQ01105 290 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 OCRLQ01968 901 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PAK1Q13153 545 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ELAVL1Q15717 326 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 SPDYAQ5MJ70 313 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3GQ6DHY5 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3CQ6IPX1 549 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DENND5AQ6IQ26 1287 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 FBXL22Q6P050 247 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 FBXO42Q6P3S6 717 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DNAJC24Q6P3W2 148 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 LILRA6Q6PI73 481 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 LRRC74BQ6ZQY2 392 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 HIST2H3AQ71DI3 136 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 LARP4Q71RC2 724 aaKnown RBP eCLIP1.41□□□□□ -2.18
XRN1-214ENST00000498077 SND1Q7KZF4 910 aaKnown RBP eCLIP1.41□□□□□ -2.18
XRN1-214ENST00000498077 STRA8Q7Z7C7 330 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ODF3L1Q8IXM7 274 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D3Q8IZP1 549 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 TMTC2Q8N394 836 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 FAM26EQ8N5C1 309 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TMCO5AQ8N6Q1 288 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CELF5Q8N6W0 485 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZNF485Q8NCK3 441 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DUSP18Q8NEJ0 188 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CD300LFQ8TDQ1 290 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GATAD2BQ8WXI9 593 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SYN2Q92777 582 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 CCDC43Q96MW1 224 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms