RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 UROSP10746 265 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 POLR2EP19388 210 aaKnown RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 ITPKAP23677 461 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 CREMQ03060 361 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 CPSF6Q16630 551 aaKnown RBP eCLIP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 FAM78AQ5JUQ0 283 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 GRAMD4Q6IC98 578 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 CERS6Q6ZMG9 384 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 MACC1Q6ZN28 852 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 KIAA2013Q8IYS2 634 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 STK40Q8N2I9 435 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 AFAP1L2Q8N4X5 818 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 KRTCAP2Q8N6L1 136 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 LRTOMTQ8WZ04 291 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 WWOXQ9NZC7 414 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 TMEM181Q9P2C4 612 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 KLQ9UEF7 1012 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 RIMS3Q9UJD0 308 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 PRPF19Q9UMS4 504 aaKnown RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 VPS9D1Q9Y2B5 631 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 CCL27Q9Y4X3 112 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 POLR3HQ9Y535 204 aaPredicted RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 PCDHB1Q9Y5F3 818 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 ZNF106Q9H2Y7 1883 aaKnown RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 C2orf16Q68DN1 1984 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 MUC3AQ02505 3323 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 CROCCQ5TZA2 2017 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 A0A1B0GTW7 788 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 ZNF839A8K0R7 811 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 LSM1O15116 133 aaKnown RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 RPS3P23396 243 aaKnown RBP eCLIP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 SLC6A2P23975 617 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 PBLDP30039 288 aaPredicted RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 NRIP1P48552 1158 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 RPS6KA2Q15349 733 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 GAB4Q2WGN9 574 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 BLOC1S3Q6QNY0 202 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 RALGPS2Q86X27 583 aaPredicted RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 PDSS2Q86YH6 399 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 SPPL2CQ8IUH8 684 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 PQLC1Q8N2U9 271 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 HTATIP2Q9BUP3 242 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 IGFLR1Q9H665 355 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 SPATS2LQ9NUQ6 558 aaKnown RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 DUS2Q9NX74 493 aaKnown RBP10.19□□□□□ -0.78
SAMM50-206ENST00000494795 CROTQ9UKG9 612 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 PRKAB1Q9Y478 270 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 NUMA1Q14980 2115 aa10.19□□□□□ -0.78
SAMM50-206ENST00000494795 SLC22A2O15244 555 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 TPST1O60507 370 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 PDHA2P29803 388 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 OXTRP30559 389 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 ADSLP30566 484 aaPredicted RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 RPL26P61254 145 aaKnown RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 STX1BP61266 288 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 CDKL1Q00532 357 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 TRIM25Q14258 630 aaKnown RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 NEK5Q6P3R8 708 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 ELMSAN1Q6PJG2 1045 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 PARS2Q7L3T8 475 aaKnown RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 MILR1Q7Z6M3 343 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 SMG7Q92540 1137 aaKnown RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.18□□□□□ -0.784e-6■■■■■ 48.1
SAMM50-206ENST00000494795 PDLIM5Q96HC4 596 aaKnown RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 TUBGCP5Q96RT8 1024 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 ZNF382Q96SR6 550 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 GPATCH1Q9BRR8 931 aaKnown RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 SLC25A23Q9BV35 468 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 FAM126AQ9BYI3 521 aaPredicted RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 PIDD1Q9HB75 910 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 SPAG4Q9NPE6 437 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 SLC6A13Q9NSD5 602 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 AIG1Q9NVV5 245 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 ZDHHC3Q9NYG2 299 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 NUDT4Q9NZJ9 180 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 MAFFQ9ULX9 164 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 PPIL1Q9Y3C6 166 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 OARD1Q9Y530 152 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 C16orf96A6NNT2 1141 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 KPNA3O00505 521 aaPredicted RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 TRIM38O00635 465 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 CD9P21926 228 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 GRIA3P42263 894 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 NSG1P42857 185 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 RPIAP49247 311 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 RPL38P63173 70 aaKnown RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 ABRQ12979 859 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 STX5Q13190 355 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 BLMHQ13867 455 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 COL9A2Q14055 689 aaPredicted RBP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 PCBP2Q15366 365 aaKnown RBP eCLIP10.18□□□□□ -0.78
SAMM50-206ENST00000494795 NR6A1Q15406 480 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 CRY1Q16526 586 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 NRF1Q16656 503 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 AP5B1Q2VPB7 878 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 HMBOX1Q6NT76 420 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 TMEM154Q6P9G4 183 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 AAGABQ6PD74 315 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 PDPRQ8NCN5 879 aa10.18□□□□□ -0.78
SAMM50-206ENST00000494795 HERVK_113Q902F9 699 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms