RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 RAB15P59190 212 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 SH3BP2P78314 561 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 TMPRSS15P98073 1019 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 SLC7A5Q01650 507 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 C19orf57Q0VDD7 668 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 CDH17Q12864 832 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 ZNF658BQ4V348 819 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 GLE1Q53GS7 698 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 DUS1LQ6P1R4 473 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 NXPE1Q8N323 547 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 NOA1Q8NC60 698 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 BBOF1Q8ND07 529 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 EXTL1Q92935 676 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 CXorf40BQ96DE9 158 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 RNF31Q96EP0 1072 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 DNAJC1Q96KC8 554 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 INSM2Q96T92 566 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 SLC12A9Q9BXP2 914 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 ZCCHC2Q9C0B9 1178 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 PIH1D1Q9NWS0 290 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 ANAPC5Q9UJX4 755 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 SNX24Q9Y343 169 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 PCDHB11Q9Y5F2 797 aa12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 CFAP20Q9Y6A4 193 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 DNMT3AQ9Y6K1 912 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 ASH1LQ9NR48 2969 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-206ENST00000491668 IGLV3-16A0A075B6K0 115 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 TRBV5-4A0A0C4DH59 114 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 MGAT4DA6NG13 374 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 GOLGA8MH3BSY2 632 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 DNALI1O14645 258 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 RAD1O60671 282 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 CRTAMO95727 393 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 DLGAP3O95886 979 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 MTHFD1P11586 935 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 TPSB2P20231 275 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 MSH3P20585 1137 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 PSMA3P25788 255 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 SEPHS1P49903 392 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 GUCY2DQ02846 1103 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 TPSAB1Q15661 275 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 TBR1Q16650 682 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 BCL7AQ4VC05 210 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 TEX35Q5T0J7 233 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 FAM92BQ6ZTR7 304 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 PRSS42Q7Z5A4 293 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 PIANPQ8IYJ0 282 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 CACNA2D3Q8IZS8 1091 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 OR52K1Q8NGK4 314 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 OR2L2Q8NH16 312 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 KLHL6Q8WZ60 621 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 CPT1BQ92523 772 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 MED8Q96G25 268 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 ZNF514Q96K75 400 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 LINC00615Q96LM1 132 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 RMDN2Q96LZ7 410 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 C19orf43Q9BQ61 176 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 RAB33BQ9H082 229 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 WWP1Q9H0M0 922 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 ZNF768Q9H5H4 540 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 SEMA5BQ9P283 1151 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 EPHA6Q9UF33 1036 aa12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 TMEM184BQ9Y519 407 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-206ENST00000491668 LOC101059948A0A1B0GTJ6 334 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 MROH6A6NGR9 719 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 SMAPO00193 183 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 TOX3O15405 576 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 STK17BO94768 372 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 SUN1O94901 812 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 SLU7O95391 586 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 ITGB2P05107 769 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 RHOXF2BP0C7M4 288 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 AMD1P17707 334 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 MC4RP32245 332 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 HALP42357 657 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 RPL21P46778 160 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 SESN2P58004 480 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 SEPT6Q14141 434 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 KCNJ11Q14654 390 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 POU6F1Q14863 301 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 MORF4L2Q15014 288 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 RNASEH2BQ5TBB1 312 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 CAPRIN2Q6IMN6 1127 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 CEACAM20Q6UY09 585 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 CERS6Q6ZMG9 384 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 SNX20Q7Z614 316 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 HOOK3Q86VS8 718 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 RBM12BQ8IXT5 1001 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 UNC5BQ8IZJ1 945 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 TEFMQ96QE5 360 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 NRTNQ99748 197 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 RHOXF2Q9BQY4 288 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 IMP3Q9NV31 184 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 NLE1Q9NVX2 485 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 FAM8A1Q9UBU6 413 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 FLNCQ14315 2725 aa12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 UBR5O95071 2799 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-206ENST00000491668 MYO18BQ8IUG5 2567 aa12.38□□□□□ -0.43
SEC61A1-206ENST00000491668 IGHV5-51A0A0C4DH38 117 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms