RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 OOSP2Q86WS3 158 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 HEXDCQ8WVB3 486 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 KLHL6Q8WZ60 621 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 HDAC10Q969S8 669 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 WBP1Q96G27 269 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 FERD3LQ96RJ6 166 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 C19orf43Q9BQ61 176 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 ARHGAP9Q9BRR9 750 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 HGH1Q9BTY7 390 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 TLR10Q9BXR5 811 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 OR52A5Q9H2C5 316 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 LNPEPQ9UIQ6 1025 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 HEATR9A2RTY3 570 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 ERI2A8K979 691 aaKnown RBP13.65□□□□□ -0.22
VTI1A-206ENST00000489142 PYCARD-AS1I3L0S3 204 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 NKX2-8O15522 239 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 OR1I1O60431 355 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 GAS8O95995 478 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 GOT2P00505 430 aaKnown RBP13.65□□□□□ -0.22
VTI1A-206ENST00000489142 ITGB6P18564 788 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 MAP4P27816 1152 aaKnown RBP13.65□□□□□ -0.22
VTI1A-206ENST00000489142 KPNA2P52292 529 aaKnown RBP13.65□□□□□ -0.22
VTI1A-206ENST00000489142 CSE1LP55060 971 aaKnown RBP13.65□□□□□ -0.22
VTI1A-206ENST00000489142 SESN2P58004 480 aaPredicted RBP13.65□□□□□ -0.22
VTI1A-206ENST00000489142 PRKG2Q13237 762 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 TUBB3Q13509 450 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 SEMA3AQ14563 771 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 SKIDA1Q1XH10 827 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 TSTD2Q5T7W7 516 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 ATP1A1-AS1Q5TC04 95 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 ARMC6Q6NXE6 501 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 KLHL35Q6PF15 583 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 GSTA5Q7RTV2 222 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 SIDT2Q8NBJ9 832 aaKnown RBP13.65□□□□□ -0.22
VTI1A-206ENST00000489142 MED8Q96G25 268 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 RAB33BQ9H082 229 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 XKR8Q9H6D3 395 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 CASS4Q9NQ75 786 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 PAK5Q9P286 719 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 COLEC10Q9Y6Z7 277 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 COL6A6A6NMZ7 2263 aa13.65□□□□□ -0.22
VTI1A-206ENST00000489142 C17orf113A0A1B0GUU1 675 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 GSAPA4D1B5 854 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 KLHL33A6NCF5 533 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 TLCD2A6NGC4 264 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 SPAG6O75602 509 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 ITGB2P05107 769 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 F8A1P23610 371 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 STAT5AP42229 794 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 ARL4DP49703 201 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 BASP1P80723 227 aaKnown RBP13.64□□□□□ -0.23
VTI1A-206ENST00000489142 NFKB2Q00653 900 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 ABHD18Q0P651 414 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 BOP1Q14137 746 aaKnown RBP13.64□□□□□ -0.23
VTI1A-206ENST00000489142 GPR19Q15760 415 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 CCNG2Q16589 344 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 PWWP2BQ6NUJ5 590 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 C6orf15Q6UXA7 325 aaPredicted RBP13.64□□□□□ -0.23
VTI1A-206ENST00000489142 ZNF662Q6ZS27 426 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 LDB1Q86U70 411 aaPredicted RBP13.64□□□□□ -0.23
VTI1A-206ENST00000489142 ACVR1CQ8NER5 493 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 OR6P1Q8NGX9 317 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 LCN9Q8WX39 176 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 ELMO1Q92556 727 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 UBXN4Q92575 508 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 KIAA1143Q96AT1 154 aaPredicted RBP13.64□□□□□ -0.23
VTI1A-206ENST00000489142 STAMBPL1Q96FJ0 436 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 SLC41A2Q96JW4 573 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 KLHL25Q9H0H3 589 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 SRMSQ9H3Y6 488 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 VPS37BQ9H9H4 285 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 CROTQ9UKG9 612 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 TCAF1Q9Y4C2 921 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 HEBP2Q9Y5Z4 205 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 RPS6KL1Q9Y6S9 549 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 ZNF462Q96JM2 2506 aa13.64□□□□□ -0.23
VTI1A-206ENST00000489142 ZNF891A8MT65 544 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-206ENST00000489142 IFRD1O00458 451 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-206ENST00000489142 BTN3A3O00478 584 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 BTN3A1O00481 513 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 NTRK1P04629 796 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 FGF5P12034 268 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 PLA2G2AP14555 144 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 ADRA1DP25100 572 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 PSMA3P25788 255 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 DLSTP36957 453 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 NSG1P42857 185 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 VPS41P49754 854 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 NFATC3Q12968 1075 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 IL11RAQ14626 422 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 TRIP13Q15645 432 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-206ENST00000489142 C16orf46Q6P387 395 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 AFTPHQ6ULP2 937 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 PACS1Q6VY07 963 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 ZNF534Q76KX8 674 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 ZNF605Q86T29 641 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 PPP1R3BQ86XI6 285 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 ESX1Q8N693 406 aa13.63□□□□□ -0.23
VTI1A-206ENST00000489142 PPHLN1Q8NEY8 458 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms