RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ACTL8Q9H568 366 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 NSUN3Q9H649 340 aaKnown RBP12.19□□□□□ -0.46
HSPG2-211ENST00000486901 HMG20AQ9NP66 347 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 COMMD8Q9NX08 183 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 TAS2R13Q9NYV9 303 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
HSPG2-211ENST00000486901 DNAH14Q0VDD8 3507 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 SLC7A4O43246 635 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 SSX4O60224 188 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 CPNE6O95741 557 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 PEX11BO96011 259 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 MT-ND2P03891 347 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 CDH1P12830 882 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 KCNE1P15382 129 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 SPNP16150 400 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 OXA1LQ15070 435 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 SF1Q15637 639 aaKnown RBP12.19□□□□□ -0.46
HSPG2-211ENST00000486901 SETMARQ53H47 684 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-211ENST00000486901 PLD3Q8IV08 490 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 BPIFB1Q8TDL5 484 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 RSPH1Q8WYR4 309 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 TSSK3Q96PN8 268 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 ZBTB20Q9HC78 741 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-211ENST00000486901 MED16Q9Y2X0 877 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 RAP2AP10114 183 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 LHX1P48742 406 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 MVKQ03426 396 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 CRY1Q16526 586 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 CCL14Q16627 93 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 CYP27C1Q4G0S4 372 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 RAB41Q5JT25 222 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 OVOS1Q6IE37 1185 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 OR4F6Q8NGB9 312 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 GMIPQ9P107 970 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 GIT1Q9Y2X7 761 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 SNX8Q9Y5X2 465 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 SOBPA7XYQ1 873 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF99A8MXY4 864 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 BCKDKO14874 412 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 BNIP3LO60238 219 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 S100BP04271 92 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 CTPS1P17812 591 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 CLK1P49759 484 aaKnown RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ADAM17P78536 824 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF846Q147U1 533 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 CPSF6Q16630 551 aaKnown RBP eCLIP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 TIGD7Q6NT04 549 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 CEP68Q76N32 757 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 GLT6D1Q7Z4J2 308 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 VTCN1Q7Z7D3 282 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 GATAD2AQ86YP4 633 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 RASAL3Q86YV0 1011 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ARRDC2Q8TBH0 407 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 SKA2Q8WVK7 121 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 PYCR2Q96C36 320 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 DMRTB1Q96MA1 342 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 AARSD1Q9BTE6 412 aaKnown RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 FAM105AQ9NUU6 356 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 PCTPQ9UKL6 214 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 C16orf96A6NNT2 1141 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 H0Y626 953 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 CACNG3O60359 315 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 SEC22BO75396 215 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 EEDO75530 441 aaKnown RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 TRIM16O95361 564 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ALOX12P18054 663 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 EMX2Q04743 252 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 SELENBP1Q13228 472 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 MAPKAPK3Q16644 382 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 C10orf120Q5SQS8 335 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 CES5AQ6NT32 575 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 RIMKLAQ8IXN7 391 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF599Q96NL3 588 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 SEPT3Q9UH03 358 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 PCDHB14Q9Y5E9 798 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 C5orf42Q9H799 3197 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 SLC12A8A0AV02 714 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF701M0R085 212 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 PDHXO00330 501 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 RAMP2O60895 175 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 PCSK1P29120 753 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 MLLT6P55198 1093 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 TBX4P57082 545 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ERVK-8P63133 956 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF792Q3KQV3 632 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 DUSP28Q4G0W2 176 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ARMC12Q5T9G4 340 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 NEK10Q6ZWH5 1172 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 RGS17Q9UGC6 210 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 TRMT6Q9UJA5 497 aaKnown RBP12.18□□□□□ -0.46
HSPG2-211ENST00000486901 ANGPTL3Q9Y5C1 460 aa12.18□□□□□ -0.46
HSPG2-211ENST00000486901 A0A096LPI6 279 aa12.17□□□□□ -0.46
HSPG2-211ENST00000486901 FKBP9O95302 570 aa12.17□□□□□ -0.46
HSPG2-211ENST00000486901 VIPP01282 170 aa12.17□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF24P17028 368 aa12.17□□□□□ -0.46
HSPG2-211ENST00000486901 GSTM2P28161 218 aa12.17□□□□□ -0.46
HSPG2-211ENST00000486901 C21orf33P30042 268 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms