RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 NDUFS7O75251 213 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 RLN1P04808 185 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 UROSP10746 265 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 HOXB6P17509 224 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 MPGP29372 298 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 ARHGAP25P42331 645 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 ALDH7A1P49419 539 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 NT5C2P49902 561 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 CLDN20P56880 219 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 ST8SIA6P61647 398 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 PPA1Q15181 289 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 CTF1Q16619 201 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 TAZQ16635 292 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 FAM174BQ3ZCQ3 159 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 RAB6CQ53S08 254 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 ZNF789Q5FWF6 425 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 CCDC158Q5M9N0 1113 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 MORN5Q5VZ52 161 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 TXNRD3NBQ6F5E7 133 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 BRAT1Q6PJG6 821 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 TMEM270Q6UE05 265 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 NHLRC1Q6VVB1 395 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 TMEM182Q6ZP80 229 aaPredicted RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 Q6ZSV7 163 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 CATSPER4Q7RTX7 472 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 YTHDF3Q7Z739 585 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 GPR180Q86V85 440 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 C4orf19Q8IY42 314 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 CLYBLQ8N0X4 340 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 TEX9Q8N6V9 391 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 TRIML1Q8N9V2 468 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 MIGA1Q8NAN2 632 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 DBF4BQ8NFT6 615 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 UTP15Q8TED0 518 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 WFIKKN2Q8TEU8 576 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 HEXDCQ8WVB3 486 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 LPAR1Q92633 364 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 RAD54LQ92698 747 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 SFXN2Q96NB2 322 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 SLX1AQ9BQ83 275 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 SPXQ9BT56 116 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 TRMOQ9BU70 441 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 SEZ6LQ9BYH1 1024 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 XPO4Q9C0E2 1151 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 RAB6CQ9H0N0 254 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 TNMDQ9H2S6 317 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 HHATLQ9HCP6 504 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 AKAP7Q9P0M2 348 aaPredicted RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 RHCGQ9UBD6 479 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 CPSF3Q9UKF6 684 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 ABT1Q9ULW3 272 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 ATXN2Q99700 1313 aaKnown RBP4.38□□□□□ -1.71
VPS13A-211ENST00000484581 A0A1W2PP11 408 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 DVL1O14640 695 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 EIF3DO15371 548 aaKnown RBP eCLIP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 ST8SIA3O43173 380 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 SEC22BO75396 215 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 PGLSO95336 258 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 TCF4P15884 667 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 NAGAP17050 411 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 ITIH1P19827 911 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 HOXD9P28356 352 aaPredicted RBP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 WNT5AP41221 380 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 LHX1P48742 406 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 ENTPD1P49961 510 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 STARD6P59095 220 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 PTENP60484 403 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 POLR2LP62875 67 aaKnown RBP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 IL1RL1Q01638 556 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 SRSF1Q07955 248 aaKnown RBP eCLIP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 NPRL3Q12980 569 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 KLF9Q13886 244 aaPredicted RBP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 GPR18Q14330 331 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 KCNT1Q5JUK3 1230 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 NOTUMQ6P988 496 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 ENPP7Q6UWV6 458 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 MEPCEQ7L2J0 689 aaKnown RBP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 ZNF367Q7RTV3 350 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 CNGA4Q8IV77 575 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 SIAH3Q8IW03 269 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 FAM219AQ8IW50 185 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 PEX5LQ8IYB4 626 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 SLC5A8Q8N695 610 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 RTL3Q8N8U3 475 aaKnown RBP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 UXS1Q8NBZ7 420 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 MPLKIPQ8TAP9 179 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 PPP4R1Q8TF05 950 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 NSMAFQ92636 917 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 INPP5DQ92835 1189 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 ST6GALNAC6Q969X2 333 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 FAM81BQ96LP2 452 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 HNRNPABQ99729 332 aaKnown RBP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 FNDC11Q9BVV2 318 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 KRTAP1-5Q9BYS1 174 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 ISCUQ9H1K1 167 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 MYNNQ9NPC7 610 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 APPL1Q9UKG1 709 aa4.37□□□□□ -1.71
VPS13A-211ENST00000484581 LOXL2Q9Y4K0 774 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms