RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 RHOJQ9H4E5 214 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 GMEB2Q9UKD1 530 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 SLC6A14Q9UN76 642 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 GPSM3Q9Y4H4 160 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 PCYT1BQ9Y5K3 369 aaPredicted RBP11.39□□□□□ -0.59
HPS4-212ENST00000481910 SNX11Q9Y5W9 270 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 DGKBQ9Y6T7 804 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 CACNA1EQ15878 2313 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 IQCF5A8MTL0 148 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 NDUFAB1O14561 156 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 TRIM16O95361 564 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 RETP07949 1114 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 CHRM3P20309 590 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 NBL1P41271 181 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 PRLHRP49683 370 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 CTSL3PQ5NE16 218 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 ZNF549Q6P9A3 640 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 TSC22D3Q99576 134 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 NDNQ99608 321 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 MCMBPQ9BTE3 642 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 NUSAP1Q9BXS6 441 aaKnown RBP11.39□□□□□ -0.59
HPS4-212ENST00000481910 SLC13A1Q9BZW2 595 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 FSCN3Q9NQT6 498 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 FETUBQ9UGM5 382 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 MTO1Q9Y2Z2 717 aaKnown RBP11.39□□□□□ -0.59
HPS4-212ENST00000481910 TP53BP1Q12888 1972 aaPredicted RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 ADAMTS9Q9P2N4 1935 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 E5RI56 91 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 H3BMM5 538 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 KHNYNO15037 678 aaKnown RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 KMOO15229 486 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 POP7O75817 140 aaKnown RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 LMNAP02545 664 aaKnown RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 FTH1P02794 183 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 CSF2P04141 144 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 ITGA2BP08514 1039 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 CTSEP14091 401 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 JUNDP17535 347 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 ITGB6P18564 788 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 ENDOUP21128 410 aaKnown RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 SAT1P21673 171 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 GCAP28676 217 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 PBLDP30039 288 aaPredicted RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 CTSKP43235 329 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 SLCO1A2P46721 670 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 LIMK2P53671 638 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 IRX4P78413 519 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 ILF2Q12905 390 aaKnown RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 PLA2G4EQ3MJ16 856 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 BCL7AQ4VC05 210 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 RBM20Q5T481 1227 aaKnown RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 SLC15A3Q8IY34 581 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 PHACTR4Q8IZ21 702 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 DCAKDQ8WVC6 231 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 FAM136AQ96C01 138 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 ELMO2Q96JJ3 720 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 PANX3Q96QZ0 392 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 OR2M4Q96R27 311 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 CCM2Q9BSQ5 444 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 AARSD1Q9BTE6 412 aaKnown RBP11.38□□□□□ -0.59
HPS4-212ENST00000481910 TSSK1BQ9BXA7 367 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 TMEM168Q9H0V1 697 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 SMOC1Q9H4F8 434 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 ERVMER34-1Q9H9K5 563 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 CAPN10Q9HC96 672 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 TM7SF3Q9NS93 570 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 SLC24A2Q9UI40 661 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 VWA7Q9Y334 891 aa11.38□□□□□ -0.59
HPS4-212ENST00000481910 FAM95CA0A1B0GW59 222 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TLDC2A0PJX2 215 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TMEM247A6NEH6 219 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 NIPSNAP2O75323 286 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 ACP5P13686 325 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 NME1P15531 152 aaKnown RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 CD9P21926 228 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TUBA4AP68366 448 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 BNC1Q01954 994 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 GRIK2Q13002 908 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 CASP8Q14790 479 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TCEA2Q15560 299 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 INSCQ1MX18 579 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 LGSNQ5TDP6 509 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 MROH9Q5TGP6 573 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 HECTD2Q5U5R9 776 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 ADGRD1Q6QNK2 874 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 USP34Q70CQ2 3546 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 AMZ2Q86W34 360 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 IQCKQ8N0W5 287 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 EPS8L3Q8TE67 593 aaKnown RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 TMEM131Q92545 1883 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 KCNJ9Q92806 393 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 CLIP3Q96DZ5 547 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 DHRS4Q9BTZ2 278 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TCEAL2Q9H3H9 227 aaPredicted RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 CAAP1Q9H8G2 361 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 PPCSQ9HAB8 311 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 SARS2Q9NP81 518 aaKnown RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 FAM8A1Q9UBU6 413 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms