RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CKAP5Q14008 2032 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ASTN1O14525 1302 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ESR1P03372 595 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF823P16415 610 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 MMP8P22894 467 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 USP4Q13107 963 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 SLC5A9Q2M3M2 681 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 XAGE5Q8WWM1 108 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 AGAP2Q99490 1192 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 OR2AG2A6NM03 316 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 FSCN2O14926 492 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 RB1P06400 928 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 FBXO43Q4G163 708 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 KXD1Q9BQD3 176 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 HECAQ9UBI9 543 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ARFGEF2Q9Y6D5 1785 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 LYPLA1O75608 230 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 PKMP14618 531 aaKnown RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ABCG1P45844 678 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 GPR158Q5T848 1215 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 MAP1SQ66K74 1059 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 GALNTL5Q7Z4T8 443 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 KAT2AQ92830 837 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 NKD2Q969F2 451 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 INTS10Q9NVR2 710 aaKnown RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 FAM237AA0A1B0GTK4 181 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 TM7SF2O76062 418 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 LYPLA2O95372 231 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 PVALBP20472 110 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 NDST2P52849 883 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 TAF10Q12962 218 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 NAE1Q13564 534 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 SLC30A6Q6NXT4 461 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ADGRA1Q86SQ6 560 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ARMC10Q8N2F6 343 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 COX18Q8N8Q8 333 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 UNC93B1Q9H1C4 597 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 CFL2Q9Y281 166 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 USP20Q9Y2K6 914 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 RPL36Q9Y3U8 105 aaKnown RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 SLC24A5Q71RS6 500 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 C9orf43Q8TAL5 461 aaPredicted RBP9.42□□□□□ -0.9
VEGFA-212ENST00000480614 HPS1Q92902 700 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF570Q96NI8 536 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 NODALQ96S42 347 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 SLC38A3Q99624 504 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 GLS2Q9UI32 602 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 CXCL14O95715 111 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 OR1D2P34982 312 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF234Q14588 700 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 CDT1Q9H211 546 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 TCF7L1Q9HCS4 588 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 FKBP7Q9Y680 259 aa9.42□□□□□ -0.9
VEGFA-212ENST00000480614 UGT1A3P35503 534 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 USP30Q70CQ3 517 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CBX3Q13185 183 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 GLYATQ6IB77 296 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 SCIMPQ6UWF3 145 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 TRIM74Q86UV6 250 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 TRIM73Q86UV7 250 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 GALNT15Q8N3T1 639 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 FAM83DQ9H4H8 585 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 PCDHB16Q9NRJ7 776 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CNOT6Q9ULM6 557 aaKnown RBP9.41□□□□□ -0.9
VEGFA-212ENST00000480614 PCDHGC3Q9UN70 934 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 SLC27A5Q9Y2P5 690 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CNTNAP1P78357 1384 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 A0A1B0GVM2 712 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 TCAF2A6NFQ2 919 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 PAPSS1O43252 624 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-212ENST00000480614 AIREO43918 545 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 GJB6O95452 261 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 S100A2P29034 98 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 ACSL1P33121 698 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 TXNL4AP83876 142 aaKnown RBP9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CDKL1Q00532 357 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CRTC2Q53ET0 693 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-212ENST00000480614 HERVK_113Q902F9 699 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 SLC22A18Q96BI1 424 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 SERINC1Q9NRX5 453 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 SEC14L4Q9UDX3 406 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 FETUBQ9UGM5 382 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 PDE10AQ9Y233 779 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 RALGAPA1Q6GYQ0 2036 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 MDC1Q14676 2089 aaKnown RBP9.41□□□□□ -0.9
VEGFA-212ENST00000480614 KANTRA0A1W2PQU2 76 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CLDN25C9JDP6 229 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 NOGQ13253 232 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 TARBP2Q15633 366 aaKnown RBP9.41□□□□□ -0.9
VEGFA-212ENST00000480614 NR4A3Q92570 626 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CSPG4P5Q96PW8 444 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 KAT8Q9H7Z6 458 aaKnown RBP9.41□□□□□ -0.9
VEGFA-212ENST00000480614 GNSP15586 552 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 MPSTP25325 297 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CCR10P46092 362 aa9.41□□□□□ -0.9
VEGFA-212ENST00000480614 CBLBQ13191 982 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms