RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 KDELR3O43731 214 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 TRBC1P01850 177 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 FGBP02675 491 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 TCF3P15923 654 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 PTPN2P17706 415 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 LDLRAP1Q5SW96 308 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 CPTPQ5TA50 214 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 ANXA8L1Q5VT79 327 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 PM20D1Q6GTS8 502 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 TRNP1Q6NT89 227 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 C11orf88Q6PI97 169 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 LRRTM3Q86VH5 581 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 SLC47A1Q96FL8 570 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 VPS4AQ9UN37 437 aa14.13□□□□□ -0.15
COL20A1-206ENST00000479501 LCHNA4D1U4 455 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 TSPAN19P0C672 248 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 GMPRP36959 345 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 PRKAG1P54619 331 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 TMPRSS11BQ86T26 416 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 SMG7Q92540 1137 aaKnown RBP14.12□□□□□ -0.15
COL20A1-206ENST00000479501 IGSF8Q969P0 613 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 REXO5Q96IC2 774 aaKnown RBP14.12□□□□□ -0.15
COL20A1-206ENST00000479501 WDR6Q9NNW5 1121 aaKnown RBP14.12□□□□□ -0.15
COL20A1-206ENST00000479501 FLRT1Q9NZU1 646 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 CIDEBQ9UHD4 219 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 NCKAP1Q9Y2A7 1128 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 G3V2T6 193 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 TMCC2O75069 709 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 TSPAN9O75954 239 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 SLC10A3P09131 477 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 SLC35G4P0C7Q5 338 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 SLC35E2BP0CK96 405 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 TDRD1Q9BXT4 1180 aaKnown RBP14.12□□□□□ -0.15
COL20A1-206ENST00000479501 SUV39H2Q9H5I1 410 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 MTMR10Q9NXD2 777 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 ENTPD4Q9Y227 616 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 K7EPI3 171 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 DNAJA2O60884 412 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 CYP11A1P05108 521 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 ETV4P43268 484 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 TRIM32Q13049 653 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 PIK3R6Q5UE93 754 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 MRPL10Q7Z7H8 261 aaKnown RBP14.12□□□□□ -0.15
COL20A1-206ENST00000479501 OFCC1Q8IZS5 231 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 UXS1Q8NBZ7 420 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 CSGALNACT1Q8TDX6 532 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 ASB9Q96DX5 294 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 CDK15Q96Q40 435 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 CCDC3Q9BQI4 270 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 C1orf109Q9NX04 203 aa14.12□□□□□ -0.15
COL20A1-206ENST00000479501 CCDC189A1A4V9 331 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 CCDC182A6NF36 153 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 NCK1P16333 377 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 MAGEA6P43360 314 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PGGT1BP53609 377 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 ZSWIM7Q19AV6 140 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 FAM174BQ3ZCQ3 159 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 MZT2BQ6NZ67 158 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 TRIM40Q6P9F5 258 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 LEMD2Q8NC56 503 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 OR9I1Q8NGQ6 314 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 KIAA1191Q96A73 305 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PSKH2Q96QS6 385 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PTPN18Q99952 460 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 TCF25Q9BQ70 676 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 ZNF624Q9P2J8 865 aaPredicted RBP14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PSME2Q9UL46 239 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 TCRBV5S1A1TA0A578 114 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PRNPP04156 253 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 HOXB6P17509 224 aaKnown RBP14.11□□□□□ -0.15
COL20A1-206ENST00000479501 LEPRP48357 1165 aaKnown RBP14.11□□□□□ -0.15
COL20A1-206ENST00000479501 LRRC73Q5JTD7 316 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 NAPRTQ6XQN6 538 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 CLDN19Q8N6F1 224 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PPCDCQ96CD2 204 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 GINS4Q9BRT9 223 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 SAMD4AQ9UPU9 718 aaKnown RBP14.11□□□□□ -0.15
COL20A1-206ENST00000479501 COQ6Q9Y2Z9 468 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 E7ENX8 843 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 FAM189A1O60320 539 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 CCNKO75909 580 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 OAZ2O95190 189 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PRPS2P11908 318 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 CYBAP13498 195 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 GJA1P17302 382 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 MTHFRP42898 656 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 SEPHS1P49903 392 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 DNAJB13P59910 316 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 SRP54P61011 504 aaKnown RBP14.11□□□□□ -0.15
COL20A1-206ENST00000479501 CARTPTQ16568 116 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 TAZQ16635 292 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PKDCCQ504Y2 493 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 PLEKHG4Q58EX7 1191 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 LIX1Q8N485 282 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 DPP10Q8N608 796 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 OR2AP1Q8NGE2 309 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 SLC39A3Q9BRY0 314 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 COQ10BQ9H8M1 238 aa14.11□□□□□ -0.15
COL20A1-206ENST00000479501 DGKBQ9Y6T7 804 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms