RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 GRIA1P42261 906 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 CCDC38Q502W7 563 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 NKAIN2Q5VXU1 208 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 RANBP10Q6VN20 620 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 CEP128Q6ZU80 1094 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 TMEM135Q86UB9 458 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 TSPAN33Q86UF1 283 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 KLHDC8BQ8IXV7 354 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 Q8NA96 180 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 MCUQ8NE86 351 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 OR56A4Q8NGH8 313 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 SCRN2Q96FV2 425 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 SMIM14Q96QK8 99 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 MCCC1Q96RQ3 725 aaPredicted RBP14.25□□□□□ -0.13
USP11-207ENST00000478596 FMO2Q99518 471 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 TRIM55Q9BYV6 548 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 FAM129AQ9BZQ8 928 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 IL22Q9GZX6 179 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 TRABDQ9H4I3 376 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 FGF22Q9HCT0 170 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 SPATS2LQ9NUQ6 558 aaKnown RBP14.25□□□□□ -0.13
USP11-207ENST00000478596 SYBUQ9NX95 663 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 GRHL1Q9NZI5 618 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 PKD2L2Q9NZM6 624 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 TMEM9Q9P0T7 183 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 SPO11Q9Y5K1 396 aa14.25□□□□□ -0.13
USP11-207ENST00000478596 SPG11Q96JI7 2443 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 TMEM202A6NGA9 273 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 STX7O15400 261 aaKnown RBP14.24□□□□□ -0.13
USP11-207ENST00000478596 MLNP12872 115 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 IVDP26440 423 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 DLSTP36957 453 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 NPY2RP49146 381 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 LIG3P49916 1009 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 KIAA1024LP59773 190 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 CRADDP78560 199 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 PDE1BQ01064 536 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 PDIA2Q13087 525 aaKnown RBP14.24□□□□□ -0.13
USP11-207ENST00000478596 AGERQ15109 404 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 PTPRRQ15256 657 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 NR6A1Q15406 480 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 CNGA3Q16281 694 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 TMEM52BQ4KMG9 183 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 ALS2CLQ60I27 953 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 JMJD6Q6NYC1 403 aaPredicted RBP14.24□□□□□ -0.13
USP11-207ENST00000478596 OTUD6BQ8N6M0 293 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 CCL4L1Q8NHW4 92 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 FBXO25Q8TCJ0 367 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 CFAP36Q96G28 342 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 ZFYVE1Q9HBF4 777 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 MAGEE1Q9HCI5 957 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 SAYSD1Q9NPB0 183 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 CHMP2BQ9UQN3 213 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 COQ6Q9Y2Z9 468 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 NAV3Q8IVL0 2385 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 TACC2O95359 2948 aa14.24□□□□□ -0.13
USP11-207ENST00000478596 NIPBLQ6KC79 2804 aaeCLIP14.23□□□□□ -0.13
USP11-207ENST00000478596 A0A0U1RQS6 177 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 CDC14CA4D256 554 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 BUD23O43709 281 aaKnown RBP14.23□□□□□ -0.13
USP11-207ENST00000478596 AVILO75366 819 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 CLDN7O95471 211 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 LHCGRP22888 699 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 GPLD1P80108 840 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 TMPRSS15P98073 1019 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 DHX9Q08211 1270 aaKnown RBP14.23□□□□□ -0.13
USP11-207ENST00000478596 TAF1AQ15573 450 aaPredicted RBP14.23□□□□□ -0.13
USP11-207ENST00000478596 ERCC6LQ2NKX8 1250 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 HP1BP3Q5SSJ5 553 aaPredicted RBP14.23□□□□□ -0.13
USP11-207ENST00000478596 SP5Q6BEB4 398 aaPredicted RBP14.23□□□□□ -0.13
USP11-207ENST00000478596 SPNS3Q6ZMD2 512 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 ZNF534Q76KX8 674 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 ARHGAP22Q7Z5H3 698 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 ANKMY2Q8IV38 441 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 GSPT2Q8IYD1 628 aaKnown RBP14.23□□□□□ -0.13
USP11-207ENST00000478596 ZBED8Q8IZ13 594 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 ZDHHC1Q8WTX9 485 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 NUS1Q96E22 293 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 STAMBPL1Q96FJ0 436 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 LURAP1Q96LR2 239 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 SLC25A23Q9BV35 468 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 ARNT2Q9HBZ2 717 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 APMAPQ9HDC9 416 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 SLAMF7Q9NQ25 335 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 KCND3Q9UK17 655 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 CROTQ9UKG9 612 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 NFU1Q9UMS0 254 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 TCAF1Q9Y4C2 921 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 ARL5AQ9Y689 179 aa14.23□□□□□ -0.13
USP11-207ENST00000478596 MED13LQ71F56 2210 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 SDR42E2A6NKP2 422 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 BANF1O75531 89 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 HOXC4P09017 264 aaPredicted RBP14.22□□□□□ -0.13
USP11-207ENST00000478596 PAMP19021 973 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 LPOP22079 712 aaPredicted RBP14.22□□□□□ -0.13
USP11-207ENST00000478596 KELP23276 732 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 ADRA1DP25100 572 aa14.22□□□□□ -0.13
USP11-207ENST00000478596 CARSP49589 748 aaKnown RBP14.22□□□□□ -0.13
USP11-207ENST00000478596 DRG2P55039 364 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms