RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 JRKLQ9Y4A0 524 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 SNX5Q9Y5X3 404 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 ASTN2O75129 1339 aaPredicted RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 A0A0B4J293 547 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 TEX13DA0A0J9YY54 714 aaPredicted RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 GLOD5A6NK44 160 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 A6NL46 340 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 TO15178 435 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 SSX4O60224 188 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 PRAMEF11O60813 436 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 SLC22A3O75751 556 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 PGM3O95394 542 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 GCNT3O95395 438 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 TPOP07202 933 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 H1F0P07305 194 aaKnown RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 UMODP07911 640 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 PSMC4P43686 418 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 HSD17B4P51659 736 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 GRAPQ13588 217 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 PLBD1Q6P4A8 553 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 DNAAF5Q86Y56 855 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 SCML4Q8N228 414 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 GUF1Q8N442 669 aaKnown RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 MINDY1Q8N5J2 469 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 WDR20Q8TBZ3 569 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 PTPMT1Q8WUK0 201 aaPredicted RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 ERLEC1Q96DZ1 483 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 MTERF3Q96E29 417 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 ALG14Q96F25 216 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 HES6Q96HZ4 224 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 RADILQ96JH8 1075 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 PRMT6Q96LA8 375 aaPredicted RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 C17orf77Q96MU5 243 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 NEK1Q96PY6 1258 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 SLA2Q9H6Q3 261 aa3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 APOBEC3GQ9HC16 384 aaKnown RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 CPSF2Q9P2I0 782 aaKnown RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 PPIEQ9UNP9 301 aaKnown RBP3.7□□□□□ -1.82
SMARCA1-204ENST00000478420 LOC102723996A0A087X1L8 192 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 GPR75-ASB3A0A0A6YYF3 556 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 ELOVL7A1L3X0 281 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 GTPBP10A4D1E9 387 aaKnown RBP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 MAGEB17A8MXT2 336 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 PRKNO60260 465 aaPredicted RBP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 DKC1O60832 514 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 IGHDP01880 384 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 PRSS1P07477 247 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 CKMT2P17540 419 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 NR1D1P20393 614 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 ANOS1P23352 680 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 CTNNA1P35221 906 aaKnown RBP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 NR2C2P49116 596 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 MFAP5Q13361 173 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 BAATQ14032 418 aaPredicted RBP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 PSMD6Q15008 389 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 HECTD3Q5T447 861 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 ADGRA1Q86SQ6 560 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 FBXO39Q8N4B4 442 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 AFAP1Q8N556 730 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 SYT2Q8N9I0 419 aaPredicted RBP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 L3MBTL4Q8NA19 623 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 ZNF473Q8WTR7 871 aaKnown RBP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 LPGAT1Q92604 370 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 ZNF622Q969S3 477 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 STAMBPL1Q96FJ0 436 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 VMP1Q96GC9 406 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 ZNF354BQ96LW1 612 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 OR6C1Q96RD1 312 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 TFB2MQ9H5Q4 396 aaKnown RBP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 SDF2L1Q9HCN8 221 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 MBNL1Q9NR56 388 aaKnown RBP3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 NPAP1Q9NZP6 1156 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 PASKQ96RG2 1323 aa3.69□□□□□ -1.82
SMARCA1-204ENST00000478420 PRSS51A0A1B0GVH4 220 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 MED19A0JLT2 244 aaPredicted RBP3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 C19orf81C9J6K1 198 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 FAM72CH0Y354 149 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 IPO8O15397 1037 aaKnown RBP3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 SYNCRIPO60506 623 aaKnown RBP3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 ERAL1O75616 437 aaKnown RBP3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 CREG1O75629 220 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 CAVIN2O95810 425 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 BCL10O95999 233 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 IGKV3-20P01619 116 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 NR3C1P04150 777 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 NR2F1P10589 423 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 PAX1P15863 534 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 MSH3P20585 1137 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 KRTAP10-9P60411 292 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 RPS18P62269 152 aaKnown RBP3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 IFI35P80217 286 aaPredicted RBP3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 PRKAA1Q13131 559 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 DMP1Q13316 513 aaPredicted RBP3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 PPP2R5CQ13362 524 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 NR1D2Q14995 579 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 BMP2KLQ5H9B9 411 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 FAM72AQ5TYM5 149 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 GARNL3Q5VVW2 1013 aa3.68□□□□□ -1.82
SMARCA1-204ENST00000478420 GPR139Q6DWJ6 353 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms