RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 APPL1Q9UKG1 709 aa13.17□□□□□ -0.3
HDAC7-221ENST00000477203 ANGPTL2Q9UKU9 493 aa13.17□□□□□ -0.3
HDAC7-221ENST00000477203 RIMKLBQ9ULI2 386 aa13.17□□□□□ -0.3
HDAC7-221ENST00000477203 ERVW-1Q9UQF0 538 aa13.17□□□□□ -0.3
HDAC7-221ENST00000477203 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 E2F3O00716 465 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 TPST1O60507 370 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 CTSLP07711 333 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 B4GALNT1Q00973 533 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 CPSF6Q16630 551 aaKnown RBP eCLIP13.16□□□□□ -0.3
HDAC7-221ENST00000477203 CDKN3Q16667 212 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 TIGD2Q4W5G0 525 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 GOLGA7Q7Z5G4 137 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 RNF175Q8N4F7 328 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 NXPE3Q969Y0 559 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 VOPP1Q96AW1 172 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 PCDH12Q9NPG4 1184 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 KLQ9UEF7 1012 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
HDAC7-221ENST00000477203 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 NRP2O60462 931 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 SYNCRIPO60506 623 aaKnown RBP13.16□□□□□ -0.3
HDAC7-221ENST00000477203 XYLBO75191 536 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 CAPN3P20807 821 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 PSMD7P51665 324 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 CDC16Q13042 620 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 DHCR24Q15392 516 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 NR6A1Q15406 480 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 STK40Q8N2I9 435 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
HDAC7-221ENST00000477203 RIOK2Q9BVS4 552 aaKnown RBP13.16□□□□□ -0.3
HDAC7-221ENST00000477203 ARL15Q9NXU5 204 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 HS3ST2Q9Y278 367 aa13.16□□□□□ -0.3
HDAC7-221ENST00000477203 TMEM221A6NGB7 291 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 RPS17P08708 135 aaKnown RBP13.15□□□□□ -0.3
HDAC7-221ENST00000477203 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-221ENST00000477203 ME2P23368 584 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 ITPKAP23677 461 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 CCR7P32248 378 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 NNMTP40261 264 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 RGS4P49798 205 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 GTF2H2Q13888 395 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 GPRC6AQ5T6X5 926 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 GTF2H2CQ6P1K8 395 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 OR56A4Q8NGH8 313 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 SLC35B4Q969S0 331 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 SLX1AQ9BQ83 275 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 GRIP2Q9C0E4 1043 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 RETREG1Q9H6L5 497 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 POPDC3Q9HBV1 291 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 SARDHQ9UL12 918 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 PRORSD1PA6NEY8 169 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 H7C0S8 307 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 ANGPT2O15123 496 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 CHEK2O96017 543 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 LBPP18428 481 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 HMOX2P30519 316 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 DGKGP49619 791 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 NEK2P51955 445 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 NFKB2Q00653 900 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 ABRQ12979 859 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 GPM6BQ13491 265 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 CRY1Q16526 586 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 ZNF423Q2M1K9 1284 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 MPP7Q5T2T1 576 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 KANK2Q63ZY3 851 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 SLC22A15Q8IZD6 547 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 ABHD8Q96I13 439 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 SERPINI1Q99574 410 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-221ENST00000477203 TMPRSS11EQ9UL52 423 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 USP22Q9UPT9 525 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 RNF11Q9Y3C5 154 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 PCDHGA7Q9Y5G6 932 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 GMEB1Q9Y692 573 aa13.15□□□□□ -0.3
HDAC7-221ENST00000477203 PRR23AA6NEV1 266 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 NDUFB5O43674 189 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 SOCS5O75159 536 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 E2F6O75461 281 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 PREPP48147 710 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 DGKQP52824 942 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 MED21Q13503 144 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 COL9A2Q14055 689 aaPredicted RBP13.15□□□□□ -0.31
HDAC7-221ENST00000477203 ABRAXAS2Q15018 415 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 ACOX1Q15067 660 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 ZNF77Q15935 545 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 PIGGQ5H8A4 983 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 RARS2Q5T160 578 aaKnown RBP13.15□□□□□ -0.31
HDAC7-221ENST00000477203 CERS6Q6ZMG9 384 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 MILR1Q7Z6M3 343 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 PGAM4Q8N0Y7 254 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 MIER2Q8N344 545 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 NCSTNQ92542 709 aa13.15□□□□□ -0.31
HDAC7-221ENST00000477203 RAD51BO15315 384 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 TULP3O75386 442 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 ESRRBO95718 433 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 TFPTP0C1Z6 253 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms