RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 DCBLD2Q96PD2 775 aa13.11□□□□□ -0.31
ACTN4-205ENST00000477174 TAAR9Q96RI9 348 aa13.11□□□□□ -0.31
ACTN4-205ENST00000477174 DPH1Q9BZG8 443 aa13.11□□□□□ -0.31
ACTN4-205ENST00000477174 MVB12BQ9H7P6 319 aa13.11□□□□□ -0.31
ACTN4-205ENST00000477174 MARCH4Q9P2E8 410 aaPredicted RBP13.11□□□□□ -0.31
ACTN4-205ENST00000477174 SLC24A2Q9UI40 661 aa13.11□□□□□ -0.31
ACTN4-205ENST00000477174 PCDHGA3Q9Y5H0 932 aa13.11□□□□□ -0.31
ACTN4-205ENST00000477174 CFAP20Q9Y6A4 193 aaKnown RBP13.11□□□□□ -0.31
ACTN4-205ENST00000477174 SLC5A10A0PJK1 596 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 A8MU76 341 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 DNALI1O14645 258 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-205ENST00000477174 CCL4P13236 92 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 ITIH1P19827 911 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 RPS3P23396 243 aaKnown RBP eCLIP13.1□□□□□ -0.318e-20■■■□□ 17.7
ACTN4-205ENST00000477174 IVDP26440 423 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 ADARP55265 1226 aaKnown RBP13.1□□□□□ -0.31
ACTN4-205ENST00000477174 PLCL1Q15111 1095 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 SNAP47Q5SQN1 464 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 RNF187Q5TA31 235 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-205ENST00000477174 NEPROQ6NW34 567 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 LDB1Q86U70 411 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-205ENST00000477174 PDZD3Q86UT5 571 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 C17orf53Q8N3J3 647 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-205ENST00000477174 ACVR1CQ8NER5 493 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 ASZ1Q8WWH4 475 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 TFGQ92734 400 aaPredicted RBP13.1□□□□□ -0.31
ACTN4-205ENST00000477174 USP7Q93009 1102 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 SIGLEC10Q96LC7 697 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 TGM7Q96PF1 710 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 FERD3LQ96RJ6 166 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 ASPSCR1Q9BZE9 553 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 P2RY12Q9H244 342 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 VPS9D1Q9Y2B5 631 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 RPS6KL1Q9Y6S9 549 aa13.1□□□□□ -0.31
ACTN4-205ENST00000477174 KIF26BQ2KJY2 2108 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 BHMG1C9JSJ3 638 aaPredicted RBP13.09□□□□□ -0.31
ACTN4-205ENST00000477174 KPNA5O15131 536 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 USP1O94782 785 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 CD82P27701 267 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 ACADLP28330 430 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 CCR7P32248 378 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 ETV5P41161 510 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 PREPP48147 710 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 MAPK10P53779 464 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 GFERP55789 205 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 RAB15P59190 212 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 MC2RQ01718 297 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 DHX34Q14147 1143 aaKnown RBP13.09□□□□□ -0.31
ACTN4-205ENST00000477174 MORF4L2Q15014 288 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 TYSND1Q2T9J0 566 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 SYTL3Q4VX76 610 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 PTRHD1Q6GMV3 140 aaKnown RBP13.09□□□□□ -0.31
ACTN4-205ENST00000477174 PRSS42Q7Z5A4 293 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 LMNTD2Q8IXW0 634 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 BMPERQ8N8U9 685 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 PHC3Q8NDX5 983 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
ACTN4-205ENST00000477174 KCNE4Q8WWG9 221 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 RSC1A1Q92681 617 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 FCRL3Q96P31 734 aaPredicted RBP13.09□□□□□ -0.31
ACTN4-205ENST00000477174 PANX3Q96QZ0 392 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 NAT9Q9BTE0 207 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 DDA1Q9BW61 102 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 TFB2MQ9H5Q4 396 aaKnown RBP13.09□□□□□ -0.31
ACTN4-205ENST00000477174 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 HRASLS2Q9NWW9 162 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 OCIAD1Q9NX40 245 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 SEMA5BQ9P283 1151 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 KLHL3Q9UH77 587 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 GNPTGQ9UJJ9 305 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 MAD1L1Q9Y6D9 718 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 CFAP47Q6ZTR5 3102 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 AHCTF1Q8WYP5 2266 aa13.09□□□□□ -0.31
ACTN4-205ENST00000477174 ZCWPW2A0A1B0GU75 182 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 OR5K3A6NET4 321 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 EFCAB7A8K855 629 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 C9orf172C9J069 976 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 H3BMM5 538 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 AGRPO00253 132 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 PRAMEF10O60809 474 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 GPC4O75487 556 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 SLCO2B1O94956 709 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 TTC4O95801 387 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 ESR1P03372 595 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 APOA4P06727 396 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 OGNP20774 298 aaKnown RBP13.08□□□□□ -0.32
ACTN4-205ENST00000477174 AOAHP28039 575 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 ABCG1P45844 678 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 LEPRP48357 1165 aaKnown RBP13.08□□□□□ -0.32
ACTN4-205ENST00000477174 TLE3Q04726 772 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 THOC5Q13769 683 aaKnown RBP13.08□□□□□ -0.32
ACTN4-205ENST00000477174 BOP1Q14137 746 aaKnown RBP13.08□□□□□ -0.32
ACTN4-205ENST00000477174 BRD3Q15059 726 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 DNAJC21Q5F1R6 531 aaKnown RBP13.08□□□□□ -0.32
ACTN4-205ENST00000477174 DCAF12Q5T6F0 453 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 CACHD1Q5VU97 1274 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 IZUMO3Q5VZ72 239 aa13.08□□□□□ -0.32
ACTN4-205ENST00000477174 IRGCQ6NXR0 463 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms