RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 RIT1Q92963 219 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CFAP57Q96MR6 1250 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TMEM47Q9BQJ4 181 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 GTPBP2Q9BX10 602 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 PUS3Q9BZE2 481 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 SLA2Q9H6Q3 261 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ANKZF1Q9H8Y5 726 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CD320Q9NPF0 282 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PAPOLBQ9NRJ5 636 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 COMMD8Q9NX08 183 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 SMPD3Q9NY59 655 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 TMOD2Q9NZR1 351 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 STK39Q9UEW8 545 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 SLC24A2Q9UI40 661 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 HPCAL4Q9UM19 191 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PADI2Q9Y2J8 665 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.62□□□□□ -1.99
XRN1-210ENST00000472697 RAP2CQ9Y3L5 183 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TMED3Q9Y3Q3 217 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 SNX9Q9Y5X1 595 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TNRC6CQ9HCJ0 1690 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 HFM1A2PYH4 1435 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 CCDC144AA2RUR9 1427 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 C1orf167Q5SNV9 1468 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 DHX57Q6P158 1386 aaKnown RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 A0A0B4J203 849 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 CENPVL1A0A0U1RR11 272 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 PMS2P1A4D2B8 440 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 ANKUB1A6NFN9 424 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 ANKRD61A6NGH8 418 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 J3QR06 171 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 SMIM22K7EJ46 135 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 WDR46O15213 610 aaKnown RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 FCGR3BO75015 233 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 NEURL1O76050 574 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 TRIM16O95361 564 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 VNN2O95498 520 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 MT-CO3P00414 261 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 TAL1P17542 331 aaPredicted RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 LAG3P18627 525 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 CYP2A7P20853 494 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 HMGB2P26583 209 aaKnown RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 DCTDP32321 178 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 FRKP42685 505 aaPredicted RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 FASLGP48023 281 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 PPP3CCP48454 512 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 SRP54P61011 504 aaKnown RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 CCNA1P78396 465 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 ZNF415Q09FC8 603 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 ARHGEF6Q15052 776 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 EFNB3Q15768 340 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 TCTN1Q2MV58 587 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 SMTNL2Q2TAL5 461 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 ENTPD8Q5MY95 495 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 Q5PR19 223 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 AMIGO2Q86SJ2 522 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 LMNTD1Q8N9Z9 388 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 CCDC63Q8NA47 563 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 MCUQ8NE86 351 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 OR8J1Q8NGP2 316 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 EXOC6Q8TAG9 804 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 ARHGAP45Q92619 1136 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 SPACA9Q96E40 222 aaPredicted RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 CCDC120Q96HB5 630 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 SLC41A2Q96JW4 573 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 NECTIN4Q96NY8 510 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 PIGQQ9BRB3 760 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 AIFM2Q9BRQ8 373 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 THAP7Q9BT49 309 aaPredicted RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 SEMA6AQ9H2E6 1030 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 DPH5Q9H2P9 285 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 SRD5A3Q9H8P0 318 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 ACTR8Q9H981 624 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 RPF1Q9H9Y2 349 aaKnown RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 PIGVQ9NUD9 493 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 UTS2RQ9UKP6 389 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 C2CD2Q9Y426 696 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 PEAK1Q9H792 1746 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 CRYBG1Q9Y4K1 1723 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 NRXN3Q9Y4C0 1643 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 BCL9O00512 1426 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 TNS2Q63HR2 1409 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 NPHP3Q7Z494 1330 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 TCRBV21S2A2A0A5A6 115 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 C17orf102A2RUQ5 167 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 TMEM202A6NGA9 273 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 MTX2O75431 263 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 JRKO75564 520 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 CHRNGP07510 517 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 TFPIP10646 304 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 ACP2P11117 423 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 SRCP12931 536 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 VCLP18206 1134 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 JAK1P23458 1154 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 CORO1AP31146 461 aaKnown RBP2.61□□□□□ -1.99
XRN1-210ENST00000472697 GDI1P31150 447 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 MAGEA4P43358 317 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 PPP2CBP62714 309 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 PPP2CAP67775 309 aa2.61□□□□□ -1.99
XRN1-210ENST00000472697 CFHR1Q03591 330 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms