RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 DCP1BQ8IZD4 617 aaKnown RBP1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 CIARTQ8N365 385 aaPredicted RBP1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 CPSF7Q8N684 471 aaKnown RBP1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 PI4KAP1Q8N8J0 262 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 KCNH5Q8NCM2 988 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 MCUQ8NE86 351 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 OR2AJ1Q8NGZ0 328 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 EXD1Q8NHP7 514 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 OLIG1Q8TAK6 271 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 ATL1Q8WXF7 558 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 FAM81BQ96LP2 452 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 SGK494Q96LW2 274 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 MS4A10Q96PG2 267 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 ANKRD2Q9GZV1 360 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 ARRDC1-AS1Q9H2J1 176 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 DPAGT1Q9H3H5 408 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 GOLPH3LQ9H4A5 285 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 ZCCHC17Q9NP64 241 aaKnown RBP1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 ACKR4Q9NPB9 350 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 CCDC177Q9NQR7 707 aaPredicted RBP1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 TAB2Q9NYJ8 693 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 BCCIPQ9P287 314 aaKnown RBP eCLIP1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 MALT1Q9UDY8 824 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 LRWD1Q9UFC0 647 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 DDX25Q9UHL0 483 aaKnown RBP1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 TUBE1Q9UJT0 475 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 POU2F3Q9UKI9 436 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 PCDHGB1Q9Y5G3 927 aa1.81□□□□□ -2.12
NUCKS1-202ENST00000464938 TRIP12Q14669 1992 aaPredicted RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 EDDM13A0A1B0GTR0 161 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 PLSCR5A0PG75 271 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 DENND3A2RUS2 1198 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 URADA6NGE7 173 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CCDC188H7C350 402 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 TRIM77I1YAP6 450 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 IKBKBO14920 756 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CLGNO14967 610 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 XRCC3O43542 346 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 PRKNO60260 465 aaPredicted RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 RECQL5O94762 991 aaPredicted RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 SLCO2B1O94956 709 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 WDPCPO95876 746 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 F7P08709 466 aaPredicted RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 QDPRP09417 244 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 OR2T7P0C7T2 308 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 MYBL1P10243 752 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 PAX1P15863 534 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 GJA1P17302 382 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CBLP22681 906 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 MCCP23508 829 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 DGKAP23743 735 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CPT2P23786 658 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 HOXC8P31273 242 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 GABRA5P31644 462 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 DCTP40126 519 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CAPZA2P47755 286 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 NR2C2P49116 596 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CSE1LP55060 971 aaKnown RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 DLX5P56178 289 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 ERVFC1-1P60608 527 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 MAT1AQ00266 395 aaKnown RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 POU3F1Q03052 451 aaPredicted RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 PRKCZQ05513 592 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 ARL16Q0P5N6 197 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 PRKAA1Q13131 559 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 PRPF4BQ13523 1007 aaKnown RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 KRT33BQ14525 404 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 ZRSR1Q15695 479 aaKnown RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 DUOXA1Q1HG43 343 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 FAM133BQ5BKY9 247 aaKnown RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 SPECC1Q5M775 1068 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CCNYL2Q5T2Q4 361 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CST9LP1Q5W188 147 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 KRT80Q6KB66 452 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 PRR27Q6MZM9 219 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 KLC3Q6P597 504 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 C9orf139Q6ZV77 190 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CHST3Q7LGC8 479 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CCDC186Q7Z3E2 898 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 NFE4Q86UQ8 179 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 EXOC3L1Q86VI1 746 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 TMEM173Q86WV6 379 aaPredicted RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 TICAM2Q86XR7 235 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 GPALPP1Q8IXQ4 340 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 FBXO39Q8N4B4 442 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 AFAP1Q8N556 730 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 POC1AQ8NBT0 407 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 Q8NFD4 153 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 SPATA3Q8NHX4 192 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 FGFBP3Q8TAT2 258 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 SPATA20Q8TB22 786 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 PPP4R1Q8TF05 950 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 TEKT4Q8WW24 435 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 DAZLQ92904 295 aaKnown RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 LINGO1Q96FE5 620 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 RADILQ96JH8 1075 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 CTAGE1Q96RT6 745 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 LMF2Q9BU23 707 aaKnown RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 POLR3CQ9BUI4 534 aaPredicted RBP1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 SLC25A23Q9BV35 468 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms