RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	FBXO40	Q9UH90	709 aa		3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	APPL1	Q9UKG1	709 aa		3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	CDH7	Q9ULB5	785 aa		3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	PIN4	Q9Y237	131 aa	Known RBP	3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	RRP15	Q9Y3B9	282 aa	Known RBP	3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	CLIC4	Q9Y696	253 aa		3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	CHD8	Q9HCK8	2581 aa		3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	ABCC6	O95255	1503 aa		3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	CASKIN1	Q8WXD9	1431 aa		3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	TCF20	Q9UGU0	1960 aa	Known RBP	3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	CACNA1S	Q13698	1873 aa		3.18	□□□□□ -1.9
FXR1-204	ENST00000461044	LTN1	O94822	1766 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	LAMB2	P55268	1798 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	KAT6A	Q92794	2004 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ANKRD30B	Q9BXX2	1392 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	C4A	P0C0L4	1744 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044		A0A0A6YYC8	382 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	OOEP	A6NGQ2	149 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TRIM77	I1YAP6	450 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044		I3L1I5	382 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	PPP6C	O00743	305 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	IFIT3	O14879	490 aa	Known RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	EIF3D	O15371	548 aa	Known RBP eCLIP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	MSI1	O43347	362 aa	Known RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ATP2C2	O75185	946 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	DDN	O94850	711 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	NFATC1	O95644	943 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ICAM1	P05362	532 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	NPS	P0C0P6	89 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	LINGO3	P0C6S8	592 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TSPY4	P0CV99	314 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TSPY10	P0CW01	314 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ACTN1	P12814	892 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TYMP	P19971	482 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	HOXA11	P31270	313 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	GABRA5	P31644	462 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	PTGER1	P34995	402 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	KHK	P50053	298 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ZNF81	P51508	661 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	CASP9	P55211	416 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TPD52	P55327	224 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	SLC26A5	P58743	744 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	STX1B	P61266	288 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	HTD2	P86397	168 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TAZ	Q16635	292 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	PFKFB3	Q16875	520 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TCTN1	Q2MV58	587 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	MYLK3	Q32MK0	819 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	GLE1	Q53GS7	698 aa	Known RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ESCO2	Q56NI9	601 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TOR1AIP1	Q5JTV8	583 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	DHRS7B	Q6IAN0	325 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TMEM65	Q6PI78	240 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ZBTB49	Q6ZSB9	765 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	CCDC25	Q86WR0	208 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ANKRD13B	Q86YJ7	626 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ZBTB2	Q8N680	514 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ANKRD13C	Q8N6S4	541 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ROBO4	Q8WZ75	1007 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	PRCC	Q92733	491 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	SNAPC3	Q92966	411 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ST6GALNAC6	Q969X2	333 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	RRNAD1	Q96FB5	475 aa	Known RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	P2RY11	Q96G91	374 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ZC3HAV1L	Q96H79	300 aa	Known RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ERO1A	Q96HE7	468 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ZNF778	Q96MU6	729 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	GDAP1L1	Q96MZ0	367 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	SLITRK1	Q96PX8	696 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	FRG2B	Q96QU4	278 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ACOX2	Q99424	681 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TMEM47	Q9BQJ4	181 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TM2D2	Q9BX73	214 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ZNF350	Q9GZX5	532 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	PIGM	Q9H3S5	423 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TASP1	Q9H6P5	420 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ANKZF1	Q9H8Y5	726 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	PIH1D3	Q9NQM4	214 aa	Known RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	INTS10	Q9NVR2	710 aa	Known RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	TAS2R3	Q9NYW6	316 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	NDRG3	Q9UGV2	375 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	IL19	Q9UHD0	177 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	HOOK1	Q9UJC3	728 aa	Known RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	A3GALT2	U3KPV4	340 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	ATP8B3	O60423	1300 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	EMSY	Q7Z589	1322 aa		3.17	□□□□□ -1.9
FXR1-204	ENST00000461044	C4B	P0C0L5	1744 aa		3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	RANBP2	P49792	3224 aa	Known RBP	3.16	□□□□□ -1.9
FXR1-204	ENST00000461044		A0A087WV48	116 aa		3.16	□□□□□ -1.9
FXR1-204	ENST00000461044		A0A0U1RQF3	1178 aa		3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	CPED1	A4D0V7	1026 aa		3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	WDR91	A4D1P6	747 aa		3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	C5orf52	A6NGY3	159 aa		3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	AKR1B15	C9JRZ8	316 aa	Predicted RBP	3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	CCDC188	H7C350	402 aa		3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	SLC33A1	O00400	549 aa	Predicted RBP	3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	EBAG9	O00559	213 aa		3.16	□□□□□ -1.9
FXR1-204	ENST00000461044	MPHOSPH10	O00566	681 aa	Known RBP	3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms