RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 HALP42357 657 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 CD151P48509 253 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 OR1D5P58170 312 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 CCL7P80098 99 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 TIAL1Q01085 375 aaKnown RBP eCLIP13.68□□□□□ -0.224e-7■■□□□ 11.9
HDLBP-229ENST00000460826 HSPA14Q0VDF9 509 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 RPA4Q13156 261 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 ILKQ13418 452 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 NR1D2Q14995 579 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 EFTUD2Q15029 972 aaKnown RBP eCLIP13.68□□□□□ -0.223e-6■■■□□ 15.1
HDLBP-229ENST00000460826 SPRED1Q7Z699 444 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 GALNT7Q86SF2 657 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 PDZD3Q86UT5 571 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 RELL1Q8IUW5 271 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 TRIM48Q8IWZ4 208 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 GIMAP7Q8NHV1 300 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 GABPB2Q8TAK5 448 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-229ENST00000460826 FBF1Q8TES7 1133 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 ADAMTS14Q8WXS8 1223 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 CXorf40BQ96DE9 158 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 PANX3Q96QZ0 392 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 TSSK1BQ9BXA7 367 aa13.68□□□□□ -0.22
HDLBP-229ENST00000460826 RPLP0P05388 317 aaKnown RBP13.67□□□□□ -0.22
HDLBP-229ENST00000460826 APOA4P06727 396 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 PNLIPP16233 465 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 CHRM3P20309 590 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 ACADLP28330 430 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 ALDH4A1P30038 563 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 CLCN7P51798 805 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 PGGT1BP53609 377 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 INSM1Q01101 510 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-229ENST00000460826 BIRC2Q13490 618 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 GBX1Q14549 363 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 KBTBD12Q3ZCT8 623 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 CYS1Q717R9 158 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-229ENST00000460826 STRA8Q7Z7C7 330 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 SLC26A11Q86WA9 606 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 MARCH9Q86YJ5 346 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 SLC22A15Q8IZD6 547 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 CHCHD4Q8N4Q1 142 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 SIDT2Q8NBJ9 832 aaKnown RBP13.67□□□□□ -0.22
HDLBP-229ENST00000460826 PHC3Q8NDX5 983 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 ACVR1CQ8NER5 493 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 JPH3Q8WXH2 748 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-229ENST00000460826 TMEM159Q96B96 161 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 ATXN7L3BQ96GX2 97 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 GPR21Q99679 349 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 MCMBPQ9BTE3 642 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 TBC1D10AQ9BXI6 508 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 TSPYL1Q9H0U9 437 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 CCDC68Q9H2F9 335 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 SYNDIG1Q9H7V2 258 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 SLC40A1Q9NP59 571 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 LATS2Q9NRM7 1088 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 POT1Q9NUX5 634 aa13.67□□□□□ -0.22
HDLBP-229ENST00000460826 SNRNP200O75643 2136 aaKnown RBP13.67□□□□□ -0.22
HDLBP-229ENST00000460826 IGHV1OR21-1A0A087WYE8 117 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 E5RI56 91 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 NTN3O00634 580 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-229ENST00000460826 SPAG6O75602 509 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 SLCO2B1O94956 709 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 ACSL3O95573 720 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 CDKN2DP55273 166 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 E2F1Q01094 437 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 FOXC1Q12948 553 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 GPR18Q14330 331 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 TMED2Q15363 201 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 AMZ1Q400G9 498 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 ACSBG2Q5FVE4 666 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 PLEKHS1Q5SXH7 462 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 NKAIN2Q5VXU1 208 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 ZNF449Q6P9G9 518 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 CEP128Q6ZU80 1094 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 OTOAQ7RTW8 1153 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 TMPRSS9Q7Z410 1059 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 PIM3Q86V86 326 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 ZC3HC1Q86WB0 502 aaKnown RBP13.66□□□□□ -0.22
HDLBP-229ENST00000460826 ZBTB2Q8N680 514 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 CD200R1Q8TD46 325 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 ASZ1Q8WWH4 475 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 KCNJ9Q92806 393 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 SLC38A3Q99624 504 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 NRTNQ99748 197 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 LRRN3Q9H3W5 708 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 STN1Q9H668 368 aaKnown RBP13.66□□□□□ -0.22
HDLBP-229ENST00000460826 TSR3Q9UJK0 312 aaKnown RBP13.66□□□□□ -0.22
HDLBP-229ENST00000460826 ATXN7L1Q9ULK2 861 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-229ENST00000460826 COMMD10Q9Y6G5 202 aa13.66□□□□□ -0.22
HDLBP-229ENST00000460826 LILRA5A6NI73 299 aa13.65□□□□□ -0.22
HDLBP-229ENST00000460826 IFRD1O00458 451 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-229ENST00000460826 HYAL3O43820 417 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-229ENST00000460826 FAM155BO75949 473 aa13.65□□□□□ -0.22
HDLBP-229ENST00000460826 TNFRSF8P28908 595 aa13.65□□□□□ -0.22
HDLBP-229ENST00000460826 CD1CP29017 333 aa13.65□□□□□ -0.22
HDLBP-229ENST00000460826 STX2P32856 288 aa13.65□□□□□ -0.22
HDLBP-229ENST00000460826 GPR3P46089 330 aa13.65□□□□□ -0.22
HDLBP-229ENST00000460826 VSNL1P62760 191 aa13.65□□□□□ -0.22
HDLBP-229ENST00000460826 PLOD1Q02809 727 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms