RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 VWA7Q9Y334 891 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 WASF2Q9Y6W5 498 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 A6NCN8 305 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 RTCAO00442 366 aaKnown RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 E2F3O00716 465 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 RGS13O14921 159 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 PRAMEF1O95521 474 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 NPPAP01160 153 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 BPGMP07738 259 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 TFPTP0C1Z6 253 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 ETS2P15036 469 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 GNALP38405 381 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 OPRD1P41143 372 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 GLRBP48167 497 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 CDKN1CP49918 316 aaPredicted RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 CSRP3P50461 194 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 C21orf58P58505 322 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 RPP38P78345 283 aaKnown RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 OCRLQ01968 901 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 POM121L1PQ3SYA9 428 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 FAM45BPQ6NSW5 357 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 SERPINA13PQ6UXR4 307 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 MTSS1LQ765P7 747 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 SFTPA1Q8IWL2 248 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 PIANPQ8IYJ0 282 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 SMRP1Q8NCR6 262 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 FAM45AQ8TCE6 357 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 PRUNE2Q8WUY3 3088 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 KCTD4Q8WVF5 259 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 REXO5Q96IC2 774 aaKnown RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 ARL5BQ96KC2 179 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 MSLNLQ96KJ4 702 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 NECTIN4Q96NY8 510 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 RPP25Q9BUL9 199 aaKnown RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 GRIP2Q9C0E4 1043 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 PALMDQ9NP74 551 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 COPG2Q9UBF2 871 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 APPL1Q9UKG1 709 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 RUVBL2Q9Y230 463 aaKnown RBP10.23□□□□□ -0.77
HERC4-207ENST00000460168 BRWD1Q9NSI6 2320 aa10.23□□□□□ -0.77
HERC4-207ENST00000460168 KIAA1549LQ6ZVL6 1849 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 COL4A3Q01955 1670 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 A0A087X1B8 175 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 GPR39O43194 453 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ECI2O75521 394 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 SRP72O76094 671 aaKnown RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 PROCP04070 461 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CTSLP07711 333 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 TPBGLP0DKB5 382 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 HLA-EP13747 358 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 XPAP23025 273 aaPredicted RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 PTGS2P35354 604 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ASMTP46597 345 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 NAA20P61599 178 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CACNG1Q06432 222 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ARHGEF7Q14155 803 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 SF3B4Q15427 424 aaKnown RBP eCLIP10.22□□□□□ -0.77
HERC4-207ENST00000460168 CHI3L2Q15782 390 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ZNF124Q15973 351 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ITPRIPL2Q3MIP1 535 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 LRIT3Q3SXY7 679 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ATG16L1Q676U5 607 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 BORAQ6PGQ7 559 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CRTC1Q6UUV9 634 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 B3GNT6Q6ZMB0 384 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 IDO2Q6ZQW0 420 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 NUDT18Q6ZVK8 323 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CYP2U1Q7Z449 544 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 NKAIN4Q8IVV8 208 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CENPLQ8N0S6 344 aaPredicted RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 SPATA6LQ8N4H0 392 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 PBXIP1Q96AQ6 731 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 LRIG1Q96JA1 1093 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 MCCC1Q96RQ3 725 aaPredicted RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 COQ7Q99807 217 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 TSSK1BQ9BXA7 367 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ARHGEF3Q9NR81 526 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 GPRC5BQ9NZH0 403 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 COQ6Q9Y2Z9 468 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 PPIL1Q9Y3C6 166 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 GLYATL1P3A0A0U1RQE8 302 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 KPNA3O00505 521 aaPredicted RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 SNX3O60493 162 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 EDF1O60869 148 aaKnown RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 KAT7O95251 611 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 RPS2P15880 293 aaKnown RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 BPIP17213 487 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ITGALP20701 1170 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 PPARGP37231 505 aaPredicted RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 EIF2DP41214 584 aaKnown RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 KPNA2P52292 529 aaKnown RBP10.22□□□□□ -0.77
HERC4-207ENST00000460168 CDKN2DP55273 166 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 P2RX3P56373 397 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 XIAPP98170 497 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ACY1Q03154 408 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 RCN2Q14257 317 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 CSHL1Q14406 222 aa10.22□□□□□ -0.77
HERC4-207ENST00000460168 ZNF234Q14588 700 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms