RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ANKRD34CP0C6C1 535 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 CCL4P13236 92 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 NMBRP28336 390 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 PRKAA1Q13131 559 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 RNF187Q5TA31 235 aaPredicted RBP22.62■■□□□ 1.21
CBX3-204ENST00000456948 IRGCQ6NXR0 463 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 ZNF534Q76KX8 674 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 OOSP2Q86WS3 158 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 SPDYE1Q8NFV5 336 aaPredicted RBP22.62■■□□□ 1.21
CBX3-204ENST00000456948 GSDMBQ8TAX9 411 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 SLCO2A1Q92959 643 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 TCF12Q99081 682 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 DDA1Q9BW61 102 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 DDX47Q9H0S4 455 aaKnown RBP22.62■■□□□ 1.21
CBX3-204ENST00000456948 KIR3DX1Q9H7L2 352 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 KCND1Q9NSA2 647 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 PCDHGA3Q9Y5H0 932 aa22.62■■□□□ 1.21
CBX3-204ENST00000456948 FAM208BQ5VWN6 2430 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 KPNA5O15131 536 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 FGF3P11487 239 aaPredicted RBP22.61■■□□□ 1.21
CBX3-204ENST00000456948 PTRHD1Q6GMV3 140 aaKnown RBP22.61■■□□□ 1.21
CBX3-204ENST00000456948 CEACAM20Q6UY09 585 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 PDZD3Q86UT5 571 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 ACVR1CQ8NER5 493 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 GPR150Q8NGU9 434 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 ASZ1Q8WWH4 475 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 TFGQ92734 400 aaPredicted RBP22.61■■□□□ 1.21
CBX3-204ENST00000456948 MFSD3Q96ES6 412 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 RMDN2Q96LZ7 410 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 SERPINB12Q96P63 405 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 PANX3Q96QZ0 392 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 CD180Q99467 661 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 CARD6Q9BX69 1037 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 OR52A5Q9H2C5 316 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 WDR70Q9NW82 654 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 HRASLS2Q9NWW9 162 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 OGFRQ9NZT2 677 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 SLC24A2Q9UI40 661 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 GNPTGQ9UJJ9 305 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 PRSS21Q9Y6M0 314 aa22.61■■□□□ 1.21
CBX3-204ENST00000456948 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.61■■□□□ 1.21
CBX3-204ENST00000456948 PRAMEF33A0A0G2JMD5 474 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 FAM237BA0A1B0GVD1 139 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 GOLGA8MH3BSY2 632 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 MATN2O00339 956 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 OR1I1O60431 355 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 PRAMEF10O60809 474 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 AVILO75366 819 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 APOA4P06727 396 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 ETV5P41161 510 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 BOP1Q14137 746 aaKnown RBP22.6■■□□□ 1.21
CBX3-204ENST00000456948 TMED2Q15363 201 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 CACHD1Q5VU97 1274 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 ANKRD22Q5VYY1 191 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 KIAA0930Q6ICG6 404 aaPredicted RBP22.6■■□□□ 1.21
CBX3-204ENST00000456948 CAND1Q86VP6 1230 aaKnown RBP22.6■■□□□ 1.21
CBX3-204ENST00000456948 CREG2Q8IUH2 290 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 LILRA3Q8N6C8 439 aaPredicted RBP22.6■■□□□ 1.21
CBX3-204ENST00000456948 GABPB2Q8TAK5 448 aaPredicted RBP22.6■■□□□ 1.21
CBX3-204ENST00000456948 LCN9Q8WX39 176 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 UBXN4Q92575 508 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 RSC1A1Q92681 617 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 ART4Q93070 314 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 FBXO8Q9NRD0 319 aa22.6■■□□□ 1.21
CBX3-204ENST00000456948 SMAPO00193 183 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 MAP3K7O43318 606 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 LIPCP11150 499 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 ITPKBP27987 946 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 CASQ1P31415 396 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 ARL4DP49703 201 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 GFERP55789 205 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 TMPRSS3P57727 454 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 MC2RQ01718 297 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 TLE3Q04726 772 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 THOC5Q13769 683 aaKnown RBP22.59■■□□□ 1.21
CBX3-204ENST00000456948 PTK6Q13882 451 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 DHX34Q14147 1143 aaKnown RBP22.59■■□□□ 1.21
CBX3-204ENST00000456948 PRSS42Q7Z5A4 293 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 HOOK3Q86VS8 718 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 KLHL7Q8IXQ5 586 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 NAT8LQ8N9F0 302 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 SRMSQ9H3Y6 488 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 OCIAD1Q9NX40 245 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 POLG2Q9UHN1 485 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 MAD1L1Q9Y6D9 718 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 NBEAQ8NFP9 2946 aa22.59■■□□□ 1.21
CBX3-204ENST00000456948 UBA6A0AVT1 1052 aaPredicted RBP22.58■■□□□ 1.21
CBX3-204ENST00000456948 OR5K3A6NET4 321 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 C9orf172C9J069 976 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 H3BMM5 538 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 STMND1H3BQB6 276 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 NDC80O14777 642 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 POLR1CO15160 346 aaPredicted RBP22.58■■□□□ 1.21
CBX3-204ENST00000456948 TMEM63AO94886 807 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 RPN2P04844 631 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 PDHA2P29803 388 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 PREPP48147 710 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 DR1Q01658 176 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 BRD3Q15059 726 aa22.58■■□□□ 1.21
CBX3-204ENST00000456948 DNAJC21Q5F1R6 531 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms