RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 WHAMMP3Q1A5X7 153 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 TBC1D25Q3MII6 688 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 DUPD1Q68J44 220 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 NEPROQ6NW34 567 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 MAATS1Q7Z4T9 603 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 CLEC14AQ86T13 490 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 LSMEM2Q8N112 164 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.83□□□□□ -0.2
HDAC4-205ENST00000454542 ELMO1Q92556 727 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 LRRC39Q96DD0 335 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 ERP44Q9BS26 406 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 TWSG1Q9GZX9 223 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 INTS10Q9NVR2 710 aaKnown RBP13.83□□□□□ -0.2
HDAC4-205ENST00000454542 GRHL1Q9NZI5 618 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 IL1RAPL1Q9NZN1 696 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 WHRNQ9P202 907 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 EPHA6Q9UF33 1036 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 SLC24A2Q9UI40 661 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 LOXL2Q9Y4K0 774 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 HEBP2Q9Y5Z4 205 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 MRFAP1Q9Y605 127 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 CFAP20Q9Y6A4 193 aaKnown RBP13.83□□□□□ -0.2
HDAC4-205ENST00000454542 MAD1L1Q9Y6D9 718 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 TEX264Q9Y6I9 313 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 DMXL2Q8TDJ6 3036 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 LAMA5O15230 3695 aa13.83□□□□□ -0.2
HDAC4-205ENST00000454542 CELSR3Q9NYQ7 3312 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 KMT2BQ9UMN6 2715 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-205ENST00000454542 BHMG1C9JSJ3 638 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-205ENST00000454542 TLX3O43711 291 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-205ENST00000454542 NDUFS3O75489 264 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 POLBP06746 335 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 ITGA2BP08514 1039 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 AOAHP28039 575 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 SLC1A2P43004 574 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 GFERP55789 205 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 ERVPABLB-1P60509 514 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 BOP1Q14137 746 aaKnown RBP13.82□□□□□ -0.2
HDAC4-205ENST00000454542 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
HDAC4-205ENST00000454542 HIF1AQ16665 826 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 LONRF1Q17RB8 773 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 SPANXN3Q5MJ09 141 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 ZNF470Q6ECI4 717 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 USP53Q70EK8 1073 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 RAB11FIP2Q7L804 512 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 ARHGAP22Q7Z5H3 698 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 SDCCAG8Q86SQ7 713 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-205ENST00000454542 IGDCC3Q8IVU1 814 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 CNTN4Q8IWV2 1026 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 SLC22A15Q8IZD6 547 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 PDIK1LQ8N165 341 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 AHCYL2Q96HN2 611 aaKnown RBP13.82□□□□□ -0.2
HDAC4-205ENST00000454542 ZNF578Q96N58 590 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-205ENST00000454542 PWWP2AQ96N64 755 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 PANX3Q96QZ0 392 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 TSSK1BQ9BXA7 367 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 TRIM31Q9BZY9 425 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 PHACTR1Q9C0D0 580 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 MVB12BQ9H7P6 319 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 SEMA5BQ9P283 1151 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 VPS9D1Q9Y2B5 631 aa13.82□□□□□ -0.2
HDAC4-205ENST00000454542 IQCF5A8MTL0 148 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 IFRD1O00458 451 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-205ENST00000454542 SLCO2B1O94956 709 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 S1PR4O95977 384 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 ESR1P03372 595 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 ARL4CP56559 192 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 MRPS25P82663 173 aaKnown RBP13.81□□□□□ -0.2
HDAC4-205ENST00000454542 BBS9Q3SYG4 887 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 ZNF789Q5FWF6 425 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 PHF19Q5T6S3 580 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 PRSS42Q7Z5A4 293 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 GALNT7Q86SF2 657 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 KCNMB4Q86W47 210 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 PLXDC1Q8IUK5 500 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 DENND6AQ8IWF6 608 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 KRT222Q8N1A0 295 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 FBXO39Q8N4B4 442 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 OTUD6BQ8N6M0 293 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 BMPERQ8N8U9 685 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 RCBTB1Q8NDN9 531 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 ACVR1CQ8NER5 493 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 SEC14L1Q92503 715 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 SLC46A1Q96NT5 459 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 CMKLR1Q99788 373 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 FAM167BQ9BTA0 163 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 B3GNT4Q9C0J1 378 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 ACSL6Q9UKU0 697 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 ZMIZ1Q9ULJ6 1067 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 MED16Q9Y2X0 877 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 SNX24Q9Y343 169 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 PCDHGA7Q9Y5G6 932 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 EPG5Q9HCE0 2579 aa13.81□□□□□ -0.2
HDAC4-205ENST00000454542 UBA6A0AVT1 1052 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-205ENST00000454542 OR5K3A6NET4 321 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 H3BMM5 538 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 PFDN6O15212 129 aa13.8□□□□□ -0.2
HDAC4-205ENST00000454542 TOX3O15405 576 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms