RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TMCO1Q9UM00 188 aa11.56□□□□□ -0.56
VTA1-203ENST00000452973 PABPN1LA6NDY0 278 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 PLK4O00444 970 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 RNASEH2AO75792 299 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 STAMBPO95630 424 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 CYP17A1P05093 508 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ATP1B2P14415 290 aaPredicted RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 EPB42P16452 691 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 POLR2JP52435 117 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 RPL38P63173 70 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 ICA1LQ8NDH6 482 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ELMO1Q92556 727 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ZNF707Q96C28 371 aaPredicted RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 LRRC58Q96CX6 371 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 RSPRY1Q96DX4 576 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 MRGPRX3Q96LB0 322 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 TMEM74Q96NL1 305 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 SUCOQ9UBS9 1254 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 IL36AQ9UHA7 158 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 SNX13Q9Y5W8 968 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ZNF839A8K0R7 811 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 STK16O75716 305 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ANXA5P08758 320 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 ADH5P11766 374 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 IL12AP29459 219 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 PBLDP30039 288 aaPredicted RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 DGKQP52824 942 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ACOX1Q15067 660 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 IMPG1Q17R60 797 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 SULT1C3Q6IMI6 304 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 BRAT1Q6PJG6 821 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 DHFR2Q86XF0 187 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 CACUL1Q86Y37 369 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 SLC15A3Q8IY34 581 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 FAM110BQ8TC76 370 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ROPN1LQ96C74 230 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ATG10Q9H0Y0 220 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ACTR8Q9H981 624 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 BATF3Q9NR55 127 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ZNF490Q9ULM2 529 aaPredicted RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 AURKCQ9UQB9 309 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 PDE10AQ9Y233 779 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 COQ6Q9Y2Z9 468 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 PPIL1Q9Y3C6 166 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 MTCL1Q9Y4B5 1905 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 ANTXRLA6NF34 631 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 AGAP14A8MT82 685 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 K7EPI3 171 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 CLGNO14967 610 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 TPST1O60507 370 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 TULP3O75386 442 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 HIST1H2AGP0C0S8 130 aaPredicted RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 TIMP2P16035 220 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 HIST1H2ADP20671 130 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 SLC6A11P48066 632 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 ST8SIA6P61647 398 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 PTGR1Q14914 329 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 RARS2Q5T160 578 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 OGFOD2Q6N063 350 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 IRGCQ6NXR0 463 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 SLC2A7Q6PXP3 512 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 AMIGO2Q86SJ2 522 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 SPPL2CQ8IUH8 684 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 SFTPA1Q8IWL2 248 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 CLHC1Q8NHS4 586 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 PROKR1Q8TCW9 393 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 LRTOMTQ8WZ04 291 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 FOXJ1Q92949 421 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 HIST1H2AHQ96KK5 128 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 HIST1H2AJQ99878 128 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 H2AFJQ9BTM1 129 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 MRPL40Q9NQ50 206 aaKnown RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 GID8Q9NWU2 228 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 C6orf203Q9P0P8 240 aaPredicted RBP11.55□□□□□ -0.56
VTA1-203ENST00000452973 AP4S1Q9Y587 144 aa11.55□□□□□ -0.56
VTA1-203ENST00000452973 A0A1W2PP18 115 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 DPPA5A6NC42 116 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 TMEM202A6NGA9 273 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 OTOL1A6NHN0 477 aaPredicted RBP11.54□□□□□ -0.56
VTA1-203ENST00000452973 C16orf96A6NNT2 1141 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 BBIP1A8MTZ0 92 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 UPK3BL1B0FP48 263 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 UPK3BL2E5RIL1 263 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 ZNF197O14709 1029 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 ULK1O75385 1050 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 MATN4O95460 622 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 PRR35P0CG20 571 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 CYP2A6P11509 494 aaPredicted RBP11.54□□□□□ -0.56
VTA1-203ENST00000452973 MSH3P20585 1137 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 ITPKAP23677 461 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 SLC6A2P23975 617 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 VIPR1P32241 457 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 NEK2P51955 445 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 ABRQ12979 859 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 C6orf10Q5SRN2 563 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 NAIF1Q69YI7 327 aaPredicted RBP11.54□□□□□ -0.56
VTA1-203ENST00000452973 ZFP1Q6P2D0 407 aa11.54□□□□□ -0.56
VTA1-203ENST00000452973 NXPE3Q969Y0 559 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms