RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-209ENST00000446764 BOP1Q14137 746 aaKnown RBP20.33■□□□□ 0.85
GARNL3-209ENST00000446764 KRT33BQ14525 404 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 MORF4L2Q15014 288 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 PLCL1Q15111 1095 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 NEPROQ6NW34 567 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 AGBL5Q8NDL9 886 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 TFGQ92734 400 aaPredicted RBP20.33■□□□□ 0.85
GARNL3-209ENST00000446764 STAMBPL1Q96FJ0 436 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 DCBLD2Q96PD2 775 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 TGM7Q96PF1 710 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 FERD3LQ96RJ6 166 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 TSSK1BQ9BXA7 367 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 SLC24A2Q9UI40 661 aa20.33■□□□□ 0.85
GARNL3-209ENST00000446764 TPRP12270 2363 aaKnown RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 A0A087WV48 116 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 BHMG1C9JSJ3 638 aaPredicted RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 FGF3P11487 239 aaPredicted RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 OGNP20774 298 aaKnown RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 RPS3P23396 243 aaKnown RBP eCLIP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 LEPRP48357 1165 aaKnown RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 MAPK10P53779 464 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 MRPS25P82663 173 aaKnown RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 PLOD1Q02809 727 aaPredicted RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 MSS51Q4VC12 460 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 SYTL3Q4VX76 610 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 PTRHD1Q6GMV3 140 aaKnown RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 HIBCHQ6NVY1 386 aaPredicted RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 PDZD3Q86UT5 571 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 LRRC6Q86X45 466 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 KRT222Q8N1A0 295 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 PHC3Q8NDX5 983 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 C9orf72Q96LT7 481 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 C16orf45Q96MC5 204 aaPredicted RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 TCF12Q99081 682 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 TRIM31Q9BZY9 425 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 RAB33BQ9H082 229 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 OCIAD1Q9NX40 245 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.32■□□□□ 0.84
GARNL3-209ENST00000446764 EPHA6Q9UF33 1036 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 GNPTGQ9UJJ9 305 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 PCDHGA7Q9Y5G6 932 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 KNTC1P50748 2209 aa20.32■□□□□ 0.84
GARNL3-209ENST00000446764 UBA6A0AVT1 1052 aaPredicted RBP20.31■□□□□ 0.84
GARNL3-209ENST00000446764 BANF1O75531 89 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 ACADLP28330 430 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 SLC5A2P31639 672 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 ITGA8P53708 1063 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 PCBP4P57723 403 aaKnown RBP20.31■□□□□ 0.84
GARNL3-209ENST00000446764 C2orf54Q08AI8 447 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 DNAJC21Q5F1R6 531 aaKnown RBP20.31■□□□□ 0.84
GARNL3-209ENST00000446764 RNF187Q5TA31 235 aaPredicted RBP20.31■□□□□ 0.84
GARNL3-209ENST00000446764 KLHL35Q6PF15 583 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 CENPUQ71F23 418 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 CILP2Q8IUL8 1156 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 ZNF248Q8NDW4 579 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 ACVR1CQ8NER5 493 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 LPGAT1Q92604 370 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 USP7Q93009 1102 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 SNF8Q96H20 258 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 PWWP2AQ96N64 755 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 BIRC8Q96P09 236 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 MVB12BQ9H7P6 319 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 FAM169AQ9Y6X4 670 aa20.31■□□□□ 0.84
GARNL3-209ENST00000446764 EFCAB7A8K855 629 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 EFCAB8A8MWE9 144 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 C9orf172C9J069 976 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 SMAPO00193 183 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 PFDN6O15212 129 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 NVLO15381 856 aaKnown RBP20.3■□□□□ 0.84
GARNL3-209ENST00000446764 GPC4O75487 556 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 SEC31AO94979 1220 aaKnown RBP20.3■□□□□ 0.84
GARNL3-209ENST00000446764 ANKRD34CP0C6C1 535 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 PGAM1P18669 254 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 AOAHP28039 575 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 FMO4P31512 558 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 CSE1LP55060 971 aaKnown RBP20.3■□□□□ 0.84
GARNL3-209ENST00000446764 EIF3BP55884 814 aaKnown RBP20.3■□□□□ 0.84
GARNL3-209ENST00000446764 PPP1CAP62136 330 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 HSPA14Q0VDF9 509 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 THOC5Q13769 683 aaKnown RBP20.3■□□□□ 0.84
GARNL3-209ENST00000446764 LONRF1Q17RB8 773 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 BBS9Q3SYG4 887 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 CTSL3PQ5NE16 218 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 IRGCQ6NXR0 463 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 ZDHHC12Q96GR4 267 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 PANX3Q96QZ0 392 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 EBNA1BP2Q99848 306 aaKnown RBP20.3■□□□□ 0.84
GARNL3-209ENST00000446764 C20orf96Q9NUD7 363 aaPredicted RBP20.3■□□□□ 0.84
GARNL3-209ENST00000446764 HRASLS2Q9NWW9 162 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 CDYLQ9Y232 598 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 SNX24Q9Y343 169 aa20.3■□□□□ 0.84
GARNL3-209ENST00000446764 ZFC3H1O60293 1989 aaKnown RBP20.29■□□□□ 0.84
GARNL3-209ENST00000446764 OR5K3A6NET4 321 aa20.29■□□□□ 0.84
GARNL3-209ENST00000446764 FAM187AA6NFU0 413 aa20.29■□□□□ 0.84
GARNL3-209ENST00000446764 TP73O15350 636 aa20.29■□□□□ 0.84
GARNL3-209ENST00000446764 TOX3O15405 576 aaPredicted RBP20.29■□□□□ 0.84
GARNL3-209ENST00000446764 RRP8O43159 456 aaKnown RBP20.29■□□□□ 0.84
GARNL3-209ENST00000446764 KIF1CO43896 1103 aaKnown RBP20.29■□□□□ 0.84
GARNL3-209ENST00000446764 PRAMEF10O60809 474 aa20.29■□□□□ 0.84
GARNL3-209ENST00000446764 ADARP55265 1226 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms