RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TCEA3O75764 348 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PIAS1O75925 651 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KCNK2O95069 426 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CXCL14O95715 111 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TNNC2P02585 160 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 VTNP04004 478 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ERBB2P04626 1255 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PLA2G4BP0C869 781 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ERVK-10P10266 1014 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CPB1P15086 417 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 RAB3BP20337 219 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GNALP38405 381 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 DDOSTP39656 456 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CD79BP40259 229 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GRIA3P42263 894 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 WASP42768 502 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PTGIRP43119 386 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 HTR3AP46098 478 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 POU3F4P49335 361 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SERPINB9P50453 376 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 RAB13P51153 203 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GBX2P52951 348 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 UGT2B15P54855 530 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GABREP78334 506 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 HTRA4P83105 476 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 MERTKQ12866 999 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 QPRTQ15274 297 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 DUSP6Q16828 381 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 IMPG1Q17R60 797 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ASTE1Q2TB18 679 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 RFX4Q33E94 735 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZIK1Q3SY52 487 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 TBCELQ5QJ74 424 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 LIPIQ6XZB0 460 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 C17orf107Q6ZR85 190 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TMEM179Q6ZVK1 233 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SYDE1Q6ZW31 735 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 CREB3L2Q70SY1 520 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SV2BQ7L1I2 683 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 LRRC8DQ7L1W4 858 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC16A13Q7RTY0 426 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZER1Q7Z7L7 766 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CARM1Q86X55 608 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 LYSMD2Q8IV50 215 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC9A9Q8IVB4 645 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 FAM71DQ8N9W8 422 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TEX19Q8NA77 164 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SMG8Q8ND04 991 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 MCUQ8NE86 351 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 OR6S1Q8NH40 331 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MAGEE2Q8TD90 523 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 DEPDC1BQ8WUY9 529 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 DNAJA4Q8WW22 397 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 TP53INP1Q96A56 240 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TMCO6Q96DC7 493 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ELP4Q96EB1 424 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 BBS4Q96RK4 519 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 FAM129BQ96TA1 746 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 BCL7BQ9BQE9 202 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 EBF4Q9BQW3 602 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MECRQ9BV79 373 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 FUNDC2Q9BWH2 189 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 HDHD5Q9BXW7 423 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ANKRD60Q9BZ19 345 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC19A3Q9BZV2 496 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ILKAPQ9H0C8 392 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 LMAN2LQ9H0V9 348 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 DSN1Q9H410 356 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZNF768Q9H5H4 540 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 BCAS3Q9H6U6 928 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 VRTNQ9H8Y1 702 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 LRRC40Q9H9A6 602 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ACP6Q9NPH0 428 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 AGPAT3Q9NRZ7 376 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KRT84Q9NSB2 600 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ACOXLQ9NUZ1 547 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ASNSD1Q9NWL6 643 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CMTM6Q9NX76 183 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KCND2Q9NZV8 630 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 NYAP2Q9P242 653 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SH3BGRL2Q9UJC5 107 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 RIMS3Q9UJD0 308 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MAGED2Q9UNF1 606 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 GRIP1Q9Y3R0 1128 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MFHAS1Q9Y4C4 1052 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GMPPBQ9Y5P6 360 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MAFBQ9Y5Q3 323 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 SMCHD1A6NHR9 2005 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CACNA1DQ01668 2161 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CACNA1SQ13698 1873 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PAPPA2Q9BXP8 1791 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 NBEAL1Q6ZS30 2694 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TEX13CA0A0J9YWL9 993 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 OR6C74A6NCV1 312 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 POM121BA6NF01 834 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 INPPL1O15357 1258 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 XYLBO75191 536 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC22A5O76082 557 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 BEST1O76090 585 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KDM4BO94953 1096 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms