RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CAPS2Q9BXY5 557 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 DNAJC16Q9Y2G8 782 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 DGKBQ9Y6T7 804 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 TTC28Q96AY4 2481 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 WDR91A4D1P6 747 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 SYCE1LA8MT33 242 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 WNT1P04628 370 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 C8GP07360 202 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 CNR2P34972 360 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 MAPK9P45984 424 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 SRSF5Q13243 272 aaKnown RBP22.53■■□□□ 1.2
CPSF4-204ENST00000436336 ALG11Q2TAA5 492 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 METRNLQ641Q3 311 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 SBSNQ6UWP8 590 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 FAM83HQ6ZRV2 1179 aaPredicted RBP22.53■■□□□ 1.2
CPSF4-204ENST00000436336 NUDCD3Q8IVD9 361 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 MECRQ9BV79 373 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 KLC4Q9NSK0 619 aa22.53■■□□□ 1.2
CPSF4-204ENST00000436336 SLC16A5O15375 505 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 GPR37L1O60883 481 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 MATN4O95460 622 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 KCNA4P22459 653 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 PDHA2P29803 388 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 ALDH3A1P30838 453 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 SP140Q13342 867 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 LRP8Q14114 963 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 FZD2Q14332 565 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 PDK4Q16654 411 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 TTC19Q6DKK2 380 aaPredicted RBP22.52■■□□□ 1.2
CPSF4-204ENST00000436336 CCDC126Q96EE4 140 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 MAGEB18Q96M61 343 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 SIRPGQ9P1W8 387 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 ADAMTS6Q9UKP5 1117 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 ACSL5Q9ULC5 683 aa22.52■■□□□ 1.2
CPSF4-204ENST00000436336 PNMA8BQ9ULN7 279 aaPredicted RBP22.52■■□□□ 1.2
CPSF4-204ENST00000436336 TNFRSF10AO00220 468 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 HRO43593 1189 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 TNFP01375 233 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 TPBGLP0DKB5 382 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 ATP5F1P24539 256 aaPredicted RBP22.51■■□□□ 1.19
CPSF4-204ENST00000436336 LYSMD4Q5XG99 296 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 FRA10AC1Q70Z53 315 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 RD3Q7Z3Z2 195 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 PARGQ86W56 976 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 GPSM1Q86YR5 675 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 C10orf107Q8IVU9 208 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 SREK1Q8WXA9 508 aaKnown RBP22.51■■□□□ 1.19
CPSF4-204ENST00000436336 ASB11Q8WXH4 323 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 OR52A5Q9H2C5 316 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 CCDC134Q9H6E4 229 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 OXSMQ9NWU1 459 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 TRNAU1APQ9NX07 287 aaKnown RBP22.51■■□□□ 1.19
CPSF4-204ENST00000436336 OARD1Q9Y530 152 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 GON4LQ3T8J9 2241 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 PRR19A6NJB7 356 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 GFYI3L273 518 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 TLR4O00206 839 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 DLX3O60479 287 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 SMIM24O75264 130 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 RASGRP1O95267 797 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 ENO2P09104 434 aaPredicted RBP22.51■■□□□ 1.19
CPSF4-204ENST00000436336 NEFHP12036 1026 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 DHPSP49366 369 aaPredicted RBP22.51■■□□□ 1.19
CPSF4-204ENST00000436336 EIF2B5Q13144 721 aaKnown RBP22.51■■□□□ 1.19
CPSF4-204ENST00000436336 PPP1R3AQ16821 1122 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 PLK5Q496M5 336 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 UBE2R2Q712K3 238 aaPredicted RBP22.51■■□□□ 1.19
CPSF4-204ENST00000436336 HID1Q8IV36 788 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 TRIM42Q8IWZ5 723 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 EXT2Q93063 718 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 FOPNLQ96NB1 174 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 RDH14Q9HBH5 336 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 ZSCAN32Q9NX65 697 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 TMCO1Q9UM00 188 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 PLEKHM1Q9Y4G2 1056 aa22.51■■□□□ 1.19
CPSF4-204ENST00000436336 TDRD6O60522 2096 aaKnown RBP22.5■■□□□ 1.19
CPSF4-204ENST00000436336 UBXN8O00124 270 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 BCAT2O15382 392 aaPredicted RBP22.5■■□□□ 1.19
CPSF4-204ENST00000436336 SP9P0CG40 484 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 MTHFD2P13995 350 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 CLCNKAP51800 687 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 HK3P52790 923 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 PRKAA2P54646 552 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 ABRQ12979 859 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 ANGPT1Q15389 498 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 TGFBIQ15582 683 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 RASGRP3Q8IV61 690 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 SLC22A9Q8IVM8 553 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 RAB3IL1Q8TBN0 382 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 SLC12A9Q9BXP2 914 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 NUDT4Q9NZJ9 180 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 KCNK6Q9Y257 313 aa22.5■■□□□ 1.19
CPSF4-204ENST00000436336 A8MT66 165 aa22.49■■□□□ 1.19
CPSF4-204ENST00000436336 SUPT3HB4E1H0 165 aa22.49■■□□□ 1.19
CPSF4-204ENST00000436336 TRIM13O60858 407 aa22.49■■□□□ 1.19
CPSF4-204ENST00000436336 PSIP1O75475 530 aaKnown RBP22.49■■□□□ 1.19
CPSF4-204ENST00000436336 SUPT3HO75486 399 aa22.49■■□□□ 1.19
CPSF4-204ENST00000436336 ITPKAP23677 461 aa22.49■■□□□ 1.19
CPSF4-204ENST00000436336 BLKP51451 505 aa22.49■■□□□ 1.19
CPSF4-204ENST00000436336 GNGT1P63211 74 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms