RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 EMX2Q04743 252 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 GTF2H3Q13889 308 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 SPIDRQ14159 915 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 MAPKAPK3Q16644 382 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 FAM98BQ52LJ0 330 aaKnown RBP11.7□□□□□ -0.54
LIMK1-202ENST00000418310 ZDHHC13Q8IUH4 622 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 C10orf111Q8N326 155 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 FRS2Q8WU20 508 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 ADGRE3Q9BY15 652 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 DPY30Q9C005 99 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 FNIP2Q9P278 1114 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 LRFN2Q9ULH4 789 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 PCDHGA11Q9Y5H2 935 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 TRPM7Q96QT4 1865 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 TBKBP1A7MCY6 615 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 LSM1O15116 133 aaKnown RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 ENO2P09104 434 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 EEFSECP57772 596 aaKnown RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 ADGRG2Q8IZP9 1017 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 PACRGLQ8N7B6 248 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 WFDC5Q8TCV5 224 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 BCL7CQ8WUZ0 217 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 HIPK3Q9H422 1215 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 POPDC3Q9HBV1 291 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 PATJQ8NI35 1801 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 G3V2T6 193 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 STX16O14662 325 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 PRMT5O14744 637 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 XPNPEP2O43895 674 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 CLDN7O95471 211 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 PRR35P0CG20 571 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 HOXB8P17481 243 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 FSHRP23945 695 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 VAC14Q08AM6 782 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 PGS1Q32NB8 556 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 KIAA1841Q6NSI8 718 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 CCDC81Q6ZN84 652 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 PIWIL3Q7Z3Z3 882 aaKnown RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 PNPT1Q8TCS8 783 aaKnown RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 SLC13A3Q8WWT9 602 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 COMMD8Q9NX08 183 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 MARCH5Q9NX47 278 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 ZNF490Q9ULM2 529 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-202ENST00000418310 PCDHGA8Q9Y5G5 932 aa11.69□□□□□ -0.54
LIMK1-202ENST00000418310 MYO1GB0I1T2 1018 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 PFDN6O15212 129 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 SMAD6O43541 496 aaKnown RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 KDELR3O43731 214 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 STC2O76061 302 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 ZNF682O95780 498 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 IGLV3-27P01718 113 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 CDH4P55283 916 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 FKBP1BP68106 108 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 DAG1Q14118 895 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 PDCD4Q53EL6 469 aaKnown RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 GALNT18Q6P9A2 607 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 TXNDC11Q6PKC3 985 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 TET1Q8NFU7 2136 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 ZBTB18Q99592 522 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 BEGAINQ9BUH8 593 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 NUSAP1Q9BXS6 441 aaKnown RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 BRINP2Q9C0B6 783 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 LHPPQ9H008 270 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 PCDH12Q9NPG4 1184 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 CRLS1Q9UJA2 301 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 PCDHB7Q9Y5E2 793 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 MANSC4A6NHS7 340 aaPredicted RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 LOC730098B7Z3J9 87 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 H3BNC9 293 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 MITFO75030 526 aaPredicted RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 CDH1P12830 882 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 CLCN7P51798 805 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 ACLYP53396 1101 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 GPR17Q13304 367 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 DGCR6Q14129 220 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 SIM2Q14190 667 aaPredicted RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 CCNYL2Q5T2Q4 361 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 SULT1C3Q6IMI6 304 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 SBSNQ6UWP8 590 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 TPGS1Q6ZTW0 290 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 TMCO2Q7Z6W1 182 aaPredicted RBP11.68□□□□□ -0.54
LIMK1-202ENST00000418310 FNDC8Q8TC99 324 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 SNX19Q92543 992 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 SLC47A1Q96FL8 570 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 GLT1D1Q96MS3 346 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 ZNF583Q96ND8 569 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 SLC22A12Q96S37 553 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 ZNF382Q96SR6 550 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 ACTR8Q9H981 624 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 PLGRKTQ9HBL7 147 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 HPS4Q9NQG7 708 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 ZIM2Q9NZV7 527 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 H0Y858 1186 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 HTR1EP28566 365 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 C21orf59P57076 290 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 PHEXP78562 749 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 FOXM1Q08050 763 aa11.68□□□□□ -0.54
LIMK1-202ENST00000418310 CYP4F3Q08477 520 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms