RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CDKN1CP49918 316 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 GDF10P55107 478 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 HSD11B2P80365 405 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 NFKB2Q00653 900 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 CACNG1Q06432 222 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 PRKAA1Q13131 559 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 DEFB109BQ30KR1 87 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 LINC00523Q86TU6 105 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 SERPINA9Q86WD7 417 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 LILRA3Q8N6C8 439 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 ACVR1CQ8NER5 493 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 APOBEC4Q8WW27 367 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 RNF31Q96EP0 1072 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 COG4Q9H9E3 785 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 LHX9Q9NQ69 397 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 FGF21Q9NSA1 209 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 R3HDM2Q9Y2K5 976 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 MRPS18BQ9Y676 258 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 PIKFYVEQ9Y2I7 2098 aa17.14■□□□□ 0.33
PDLIM2-208ENST00000416159 A0A0U1RQJ8 604 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 MATN2O00339 956 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 IFRD1O00458 451 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 TERTO14746 1132 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 KATNA1O75449 491 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 RECKO95980 971 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 GSTM1P09488 218 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 EBLN1P0CF75 366 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 CD151P48509 253 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 GSTM4Q03013 218 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 KCNC4Q03721 635 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 RPA4Q13156 261 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 SEPT6Q14141 434 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 KCNAB1Q14722 419 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 POU6F1Q14863 301 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 TMTC4Q5T4D3 741 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 PWWP2BQ6NUJ5 590 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 SPC24Q8NBT2 197 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 OR4E2Q8NGC2 313 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 OR8K5Q8NH50 307 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 FERD3LQ96RJ6 166 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 FRMD8P1Q9BZ68 369 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 PCDHGA6Q9Y5G7 932 aa17.13■□□□□ 0.33
PDLIM2-208ENST00000416159 TCRBV7S2A1N4TA0A589 114 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 ERI2A8K979 691 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 AP2A2O94973 939 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 TIAF1O95411 115 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 POLR2CP19387 275 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 PSMA3P25788 255 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 KPNA2P52292 529 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 TUBB4BP68371 445 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 DNASE1L3Q13609 305 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 TUBB2AQ13885 445 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 SKIDA1Q1XH10 827 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 SEL1L2Q5TEA6 688 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 CERS6Q6ZMG9 384 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 TUBB2BQ9BVA1 445 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 OR52A5Q9H2C5 316 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 SRMSQ9H3Y6 488 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 CLMPQ9H6B4 373 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 MVB12BQ9H7P6 319 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 C1GALT1Q9NS00 363 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 KCND1Q9NSA2 647 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 BTRCQ9Y297 605 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 CAPN6Q9Y6Q1 641 aa17.12■□□□□ 0.33
PDLIM2-208ENST00000416159 MROH6A6NGR9 719 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 C21orf140B9A014 251 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 PYCARD-AS1I3L0S3 204 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 QSOX1O00391 747 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 CREG1O75629 220 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 GAS8O95995 478 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 CDH3P22223 829 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 FDFT1P37268 417 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 ARCN1P48444 511 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 CSRP3P50461 194 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 LAMB3Q13751 1172 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 ERV3-1Q14264 604 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 ZNF658BQ4V348 819 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 ATP1A1-AS1Q5TC04 95 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 C9orf43Q8TAL5 461 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 CT55Q8WUE5 264 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 LCN9Q8WX39 176 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 TSGA10Q9BZW7 698 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 PIH1D1Q9NWS0 290 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 SOHLH2Q9NX45 425 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 POMT2Q9UKY4 750 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 POLHQ9Y253 713 aa17.11■□□□□ 0.33
PDLIM2-208ENST00000416159 NTRK1P04629 796 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 PRSS56P0CW18 603 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 PDHA2P29803 388 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 NSG1P42857 185 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 CDH17Q12864 832 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 ITIH4Q14624 930 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 DBN1Q16643 649 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 PTRH1Q86Y79 214 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 PIANPQ8IYJ0 282 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 TAB3Q8N5C8 712 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 CLDN19Q8N6F1 224 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 DNAAF3Q8N9W5 541 aa17.1■□□□□ 0.33
PDLIM2-208ENST00000416159 OR52K1Q8NGK4 314 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms