RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 FAM149AA5PLN7 773 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 ADRB2P07550 413 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 KYAT3Q6YP21 454 aaKnown RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 OR2L2Q8NH16 312 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 GSKIPQ9P0R6 139 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 F7P08709 466 aaPredicted RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 LAG3P18627 525 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 DEFA5Q01523 94 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 TATDN1Q6P1N9 297 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 PLAGL2Q9UPG8 496 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 MAPRE3Q9UPY8 281 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 CPQQ9Y646 472 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 GPD2P43304 727 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 OGFOD2Q6N063 350 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 UPF1Q92900 1129 aaKnown RBP eCLIP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 ACO2Q99798 780 aaKnown RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 PORCNQ9H237 461 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 STOX2Q9P2F5 926 aaPredicted RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 EIF3KQ9UBQ5 218 aaKnown RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 ARL5AQ9Y689 179 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 OR2AT4A6NND4 320 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 HMGB3O15347 200 aaKnown RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 NME6O75414 186 aaPredicted RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 C8orf89P0DMQ9 161 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 PDK3Q15120 406 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 ARHGAP22Q7Z5H3 698 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 DHDDSQ86SQ9 333 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 UBQLNLQ8IYU4 475 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 PIGXQ8TBF5 258 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 NDC1Q9BTX1 674 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 CDT1Q9H211 546 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 hCG_1807616A0A1W2PRN6 198 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 TMEM11P17152 192 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 CLNKQ7Z7G1 428 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 VAT1Q99536 393 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 SLC39A3Q9BRY0 314 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 GIN1Q9NXP7 522 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 ZNF510Q9Y2H8 683 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 AP1M2Q9Y6Q5 423 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 OR14I1A6ND48 311 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 RPP38P78345 283 aaKnown RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 MPP1Q00013 466 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 CSTF1Q05048 431 aaKnown RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 E2F2Q14209 437 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 PLGLAQ15195 96 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 ANO7Q6IWH7 933 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 FSTL5Q8N475 847 aaPredicted RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 GATSQ8NAP1 163 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 MTERF1Q99551 399 aaKnown RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 NDUFS4O43181 175 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 PSEN1P49768 467 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 CRYBB1P53674 252 aaPredicted RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 DPY19L4Q7Z388 723 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 RANBP3LQ86VV4 465 aaPredicted RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 TNFRSF25Q93038 417 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 SLC5A7Q9GZV3 580 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 MED28Q9H204 178 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 C2orf92A0A1B0GVN3 265 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 IPO13O94829 963 aaKnown RBP18.23■□□□□ 0.51
SHANK3-202ENST00000414786 IGFBP5P24593 272 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 CDK7P50613 346 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 VPS26BQ4G0F5 336 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 ZNF565Q8N9K5 539 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 ERBB2P04626 1255 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 PPIGQ13427 754 aaKnown RBP eCLIP18.23■□□□□ 0.516e-7■■□□□ 13.7
SHANK3-202ENST00000414786 RDH8Q9NYR8 311 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 MICAL3Q7RTP6 2002 aa18.23■□□□□ 0.51
SHANK3-202ENST00000414786 MYO5CQ9NQX4 1742 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 E9PAM4 449 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 NOBOXO60393 691 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 ITGA2BP08514 1039 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 THRBP10828 461 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 PTPN2P17706 415 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 CYP3A5P20815 502 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 ARPC4P59998 168 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 RPL7AP62424 266 aaKnown RBP18.22■□□□□ 0.51
SHANK3-202ENST00000414786 MRPS5P82675 430 aaKnown RBP18.22■□□□□ 0.51
SHANK3-202ENST00000414786 EARS2Q5JPH6 523 aaKnown RBP18.22■□□□□ 0.51
SHANK3-202ENST00000414786 LIPMQ5VYY2 423 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 ADAD1Q96M93 576 aaKnown RBP18.22■□□□□ 0.51
SHANK3-202ENST00000414786 A6NL46 340 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 ZNF143P52747 638 aaPredicted RBP18.22■□□□□ 0.51
SHANK3-202ENST00000414786 RIOX2Q8IUF8 465 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 OR5B17Q8NGF7 314 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 HMCESQ96FZ2 354 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 ERVW-1Q9UQF0 538 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 KAT6AQ92794 2004 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 SIGLEC16A6NMB1 481 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 AURKAO14965 403 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 DHFRP00374 187 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 TGFB1P01137 390 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 SELPP16109 830 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 PTX3P26022 381 aaPredicted RBP18.22■□□□□ 0.51
SHANK3-202ENST00000414786 LPCAT4Q643R3 524 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 JAGN1Q8N5M9 183 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 ANKRD7Q92527 254 aa18.22■□□□□ 0.51
SHANK3-202ENST00000414786 LGR4Q9BXB1 951 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms