RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 EP400Q96L91 3159 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 RNF103-CHMP3A0A140T963 221 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 A0A1W2PQU0 124 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 GSAPA4D1B5 854 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 AZIN1O14977 448 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 PRMT3O60678 531 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 GABBR2O75899 941 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 SCGNO76038 276 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 CD68P34810 354 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 HYAL1Q12794 435 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 ADAM15Q13444 863 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 KDELC1Q6UW63 502 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 SLC36A4Q6YBV0 504 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 KYQ8NBH2 561 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 CHST14Q8NCH0 376 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 C2CD4AQ8NCU7 369 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 MYLIPQ8WY64 445 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 RERGQ96A58 199 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 ARNT2Q9HBZ2 717 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 C8orf4Q9NR00 106 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 AP3M1Q9Y2T2 418 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 KCTD3Q9Y597 815 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 SMAD6O43541 496 aaKnown RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 POP7O75817 140 aaKnown RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 WFS1O76024 890 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 AHSGP02765 367 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 ITGAXP20702 1163 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 RPL3P39023 403 aaKnown RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 GNPDA1P46926 289 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 BCAP31P51572 246 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 EPHA5P54756 1037 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 GPX6P59796 221 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 RGS1Q08116 209 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 CNTN1Q12860 1018 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 RIPK1Q13546 671 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 LAPTM5Q13571 262 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 GPNMBQ14956 572 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 EML3Q32P44 896 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 FUT11Q495W5 492 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 MANEALQ5VSG8 457 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 ZFP1Q6P2D0 407 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 LCN9Q8WX39 176 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 VN1R3Q9BXE9 311 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 CCDC177Q9NQR7 707 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 CHCHD3Q9NX63 227 aaKnown RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 ARPC4-TTLL3A0A0A6YYG9 625 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 FAM170BA6NMN3 283 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 MID1O15344 667 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 PAK4O96013 591 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 IVDP26440 423 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 GPC1P35052 558 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 PKNOX1P55347 436 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 FAM109BQ6ICB4 259 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 SPATA6LQ8N4H0 392 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 SIDT2Q8NBJ9 832 aaKnown RBP8.39□□□□□ -1.07
SYNE1-211ENST00000413186 HM13Q8TCT9 377 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 HCAR2Q8TDS4 363 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 SLC22A18Q96BI1 424 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 TMEM245Q9H330 911 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 SGK2Q9HBY8 427 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 NDUFA13Q9P0J0 144 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 CYP8B1Q9UNU6 501 aa8.39□□□□□ -1.07
SYNE1-211ENST00000413186 RHPN2P1A8MT19 583 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 NIPSNAP2O75323 286 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ACP5P13686 325 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 GLULP15104 373 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SERPINB3P29508 390 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SLC6A11P48066 632 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SPINT3P49223 89 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 NUDT2P50583 147 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 OLIG2Q13516 323 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 STEAP4Q687X5 459 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 C10orf107Q8IVU9 208 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 TEX26Q8N6G2 289 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ABCG4Q9H172 646 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 HEBP1Q9NRV9 189 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 ACSL5Q9ULC5 683 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SPATA2Q9UM82 520 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 LOC100653049A0A140TA62 436 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 E9PBE3 544 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 GRID2O43424 1007 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 KLHL41O60662 606 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 KRT34O76011 436 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PENKP01210 267 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SERPINA6P08185 405 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 CMPK1P30085 196 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 TLX1P31314 330 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PRKCQQ04759 706 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 NAE1Q13564 534 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 TCEA2Q15560 299 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 MLF2Q15773 248 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 TCTN1Q2MV58 587 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PPM1JQ5JR12 505 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 METTL21CQ5VZV1 264 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 FOXR1Q6PIV2 292 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 PAQR3Q6TCH7 311 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 TIFABQ6ZNK6 161 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 SRFBP1Q8NEF9 429 aaKnown RBP8.38□□□□□ -1.07
SYNE1-211ENST00000413186 OR10G6Q8NH81 332 aa8.38□□□□□ -1.07
SYNE1-211ENST00000413186 DCAKDQ8WVC6 231 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms