RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 TRAPPC9Q96Q05 1148 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 HERPUD2Q9BSE4 406 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 MLPHQ9BV36 600 aaPredicted RBP6.8□□□□□ -1.32
LSM8-202ENST00000411938 NSRP1Q9H0G5 558 aaKnown RBP6.8□□□□□ -1.32
LSM8-202ENST00000411938 CHST8Q9H2A9 424 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 CCDC134Q9H6E4 229 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 NOL6Q9H6R4 1146 aaKnown RBP6.8□□□□□ -1.32
LSM8-202ENST00000411938 WASH6PQ9NQA3 447 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 KCTD5Q9NXV2 234 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 WHRNQ9P202 907 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
LSM8-202ENST00000411938 KCNK6Q9Y257 313 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 PRKAB1Q9Y478 270 aa6.8□□□□□ -1.32
LSM8-202ENST00000411938 SPTBP11277 2137 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 GOLGA8SH3BPF8 625 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 KCNN4O15554 427 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 RIPK2O43353 540 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 PSTPIP1O43586 416 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 KLHL41O60662 606 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 CPNE3O75131 537 aaKnown RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 IPO13O94829 963 aaKnown RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 KLK3P07288 261 aaPredicted RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 PYGMP11217 842 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 ACP5P13686 325 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 F3P13726 295 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 FOLR1P15328 257 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 CHN1P15882 459 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 TEAD1P28347 426 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 ATP5DP30049 168 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 VIPR1P32241 457 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 CA5AP35218 305 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 SLC1A1P43005 524 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 RGRP47804 291 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 YBEYP58557 167 aaPredicted RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 NRG1Q02297 640 aaPredicted RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 PTP4A2Q12974 167 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 IFT88Q13099 833 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 CALCOCO2Q13137 446 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 MYBPC3Q14896 1274 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 PPP1R7Q15435 360 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 QPCTQ16769 361 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 ANKRD20A8PQ5CZ79 823 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 RNF187Q5TA31 235 aaPredicted RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 GKAP1Q5VSY0 366 aaPredicted RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 IZUMO3Q5VZ72 239 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 FBXW10Q5XX13 1052 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 ACAD10Q6JQN1 1059 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 IRGCQ6NXR0 463 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 PPP1R2P3Q6NXS1 205 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 IGFL3Q6UXB1 125 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 ADAMTSL4Q6UY14 1074 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 TRIM72Q6ZMU5 477 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 Q6ZS92 163 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 TAOK1Q7L7X3 1001 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 PRSS42Q7Z5A4 293 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 HSD11B1LQ7Z5J1 315 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 TAX1BP1Q86VP1 789 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 TMEM126BQ8IUX1 230 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 TRIM48Q8IWZ4 208 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 ZNF808Q8N4W9 903 aaPredicted RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 ZBTB2Q8N680 514 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 RTL3Q8N8U3 475 aaKnown RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 EPS8L3Q8TE67 593 aaKnown RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 CHTF18Q8WVB6 975 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 FAR1Q8WVX9 515 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 KLHL6Q8WZ60 621 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 RELTQ969Z4 430 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 RNF25Q96BH1 459 aaPredicted RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 ECHDC3Q96DC8 303 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 ZDHHC12Q96GR4 267 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 SNF8Q96H20 258 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 MAGEB5Q9BZ81 275 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 CDC42EP4Q9H3Q1 356 aaKnown RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 LRRC19Q9H756 370 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 FGF21Q9NSA1 209 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 ANAPC7Q9UJX3 599 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 TCFL5Q9UL49 500 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 PCDHGC3Q9UN70 934 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 NEU2Q9Y3R4 380 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 SLC30A1Q9Y6M5 507 aa6.79□□□□□ -1.32
LSM8-202ENST00000411938 FLNAP21333 2647 aaKnown RBP6.79□□□□□ -1.32
LSM8-202ENST00000411938 TCRBV7S2A1N4TA0A589 114 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 OR5K4A6NMS3 321 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 J3KR12 359 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 SCRG1O75711 98 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 DNAJC8O75937 253 aaPredicted RBP6.78□□□□□ -1.32
LSM8-202ENST00000411938 GAS8O95995 478 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 VIPP01282 170 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 GSTA1P08263 222 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 RAB40ALP0C0E4 278 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 RARAP10276 462 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 EPHB2P29323 1055 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 OTX2P32243 289 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 SCNN1AP37088 669 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 CSNK1DP48730 415 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 ARL4DP49703 201 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 BPIFB4P59827 614 aa6.78□□□□□ -1.32
LSM8-202ENST00000411938 UBE2IP63279 158 aaKnown RBP6.78□□□□□ -1.32
LSM8-202ENST00000411938 CAV1Q03135 178 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms