RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RBM12BQ8IXT5 1001 aaKnown RBP21.85■■□□□ 1.09
PTCD3-203ENST00000409783 ZBED8Q8IZ13 594 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 C2CD4AQ8NCU7 369 aaPredicted RBP21.85■■□□□ 1.09
PTCD3-203ENST00000409783 NUDT22Q9BRQ3 303 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 PHACTR1Q9C0D0 580 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 SYNDIG1Q9H7V2 258 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 L2HGDHQ9H9P8 463 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 RDH14Q9HBH5 336 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 IMP3Q9NV31 184 aaKnown RBP21.85■■□□□ 1.09
PTCD3-203ENST00000409783 OGFRQ9NZT2 677 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 VPS9D1Q9Y2B5 631 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 PCDHB1Q9Y5F3 818 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 ENTPD2Q9Y5L3 495 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 PFDN6O15212 129 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 ZNF500O60304 480 aaPredicted RBP21.84■■□□□ 1.09
PTCD3-203ENST00000409783 NIPSNAP2O75323 286 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 CPNE6O95741 557 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 ESR1P03372 595 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 ACADLP28330 430 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 GABRB3P28472 473 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 BOP1Q14137 746 aaKnown RBP21.84■■□□□ 1.09
PTCD3-203ENST00000409783 CLPPQ16740 277 aaPredicted RBP21.84■■□□□ 1.09
PTCD3-203ENST00000409783 GLE1Q53GS7 698 aaKnown RBP21.84■■□□□ 1.09
PTCD3-203ENST00000409783 USP53Q70EK8 1073 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 PDZD3Q86UT5 571 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 VRK3Q8IV63 474 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 SLITRK4Q8IW52 837 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 GATA6Q92908 595 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 SAYSD1Q9NPB0 183 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 MOCS1Q9NZB8 636 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 MED16Q9Y2X0 877 aa21.84■■□□□ 1.09
PTCD3-203ENST00000409783 ZW10O43264 779 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 HAUS5O94927 633 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 PKMP14618 531 aaKnown RBP21.83■■□□□ 1.09
PTCD3-203ENST00000409783 HOXB3P14651 431 aaPredicted RBP21.83■■□□□ 1.09
PTCD3-203ENST00000409783 LEPRP48357 1165 aaKnown RBP21.83■■□□□ 1.09
PTCD3-203ENST00000409783 PLOD1Q02809 727 aaPredicted RBP21.83■■□□□ 1.09
PTCD3-203ENST00000409783 ZFP36L1Q07352 338 aaKnown RBP21.83■■□□□ 1.09
PTCD3-203ENST00000409783 TEDDM1Q5T9Z0 273 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 CNSTQ6PJW8 725 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 SLC22A15Q8IZD6 547 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 LRRN4CLQ8ND94 238 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 PANX3Q96QZ0 392 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 TSSK1BQ9BXA7 367 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 LATS2Q9NRM7 1088 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 SLC17A6Q9P2U8 582 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 GALPQ9UBC7 116 aa21.83■■□□□ 1.09
PTCD3-203ENST00000409783 A0A1W2PNU3 283 aaPredicted RBP21.82■■□□□ 1.08
PTCD3-203ENST00000409783 H3BMM5 538 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 SLCO2B1O94956 709 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 CARSP49589 748 aaKnown RBP21.82■■□□□ 1.08
PTCD3-203ENST00000409783 GBX1Q14549 363 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 PIM3Q86V86 326 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 OR10G6Q8NH81 332 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 GSDMBQ8TAX9 411 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 ZFPM2Q8WW38 1151 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 ASZ1Q8WWH4 475 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 TMEM159Q96B96 161 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 FOXP3Q9BZS1 431 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 TMEM9Q9P0T7 183 aa21.82■■□□□ 1.08
PTCD3-203ENST00000409783 IFRD1O00458 451 aaPredicted RBP21.81■■□□□ 1.08
PTCD3-203ENST00000409783 CCKBRP32239 447 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 CSE1LP55060 971 aaKnown RBP21.81■■□□□ 1.08
PTCD3-203ENST00000409783 HSPA14Q0VDF9 509 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 SYTL3Q4VX76 610 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 ZNF449Q6P9G9 518 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 KIAA0408Q6ZU52 694 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 GALNT7Q86SF2 657 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 PYROXD1Q8WU10 500 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 TFGQ92734 400 aaPredicted RBP21.81■■□□□ 1.08
PTCD3-203ENST00000409783 GRAMD1AQ96CP6 724 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 ATXN7L3BQ96GX2 97 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 SEMA6CQ9H3T2 930 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 EPB41L1Q9H4G0 881 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 KIR3DX1Q9H7L2 352 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 FAM114A2Q9NRY5 505 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 PDP2Q9P2J9 529 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 SLC24A2Q9UI40 661 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 HEBP2Q9Y5Z4 205 aa21.81■■□□□ 1.08
PTCD3-203ENST00000409783 IGHV5-10-1A0A0J9YXX1 117 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 DUX1O43812 170 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 UBXN7O94888 489 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 C1QAP02745 245 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 AHSGP02765 367 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 APOA4P06727 396 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 ECHS1P30084 290 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 SSTR1P30872 391 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 INHBCP55103 352 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 GPX6P59796 221 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 MAP9Q49MG5 647 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 TMEM71Q6P5X7 295 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 WDR74Q6RFH5 385 aaPredicted RBP21.8■■□□□ 1.08
PTCD3-203ENST00000409783 PHC3Q8NDX5 983 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 OR4D9Q8NGE8 314 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 JPH3Q8WXH2 748 aaPredicted RBP21.8■■□□□ 1.08
PTCD3-203ENST00000409783 RSC1A1Q92681 617 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 TMEM74Q96NL1 305 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 MVB12BQ9H7P6 319 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 COLEC10Q9Y6Z7 277 aa21.8■■□□□ 1.08
PTCD3-203ENST00000409783 CHD8Q9HCK8 2581 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms