RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SPATA19Q7Z5L4 167 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 NUDT13Q86X67 352 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SVOPLQ8N434 492 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 COX18Q8N8Q8 333 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MAPK15Q8TD08 544 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 HNRNPLLQ8WVV9 542 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 FIG4Q92562 907 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RORBQ92753 470 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CELF1Q92879 486 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 ELMO3Q96BJ8 720 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CAPNS2Q96L46 248 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 GPER1Q99527 375 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CHP1Q99653 195 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 EFCAB11Q9BUY7 163 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RTFDC1Q9BY42 306 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 GDF3Q9NR23 364 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KLHL1Q9NR64 748 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 FARSBQ9NSD9 589 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 CISHQ9NSE2 258 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 GTF2A1LQ9UNN4 478 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TMEM14AQ9Y6G1 99 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 THSD7AQ9UPZ6 1657 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 POLEQ07864 2286 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 FANCMQ8IYD8 2048 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 NFIBO00712 420 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SUV39H1O43463 412 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 AP2A2O94973 939 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TXNDC12O95881 172 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LAMP2P13473 410 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 PORP16435 677 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 PCMT1P22061 227 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ERP29P30040 261 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 STK19P49842 368 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 TAS2R41P59536 307 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RPS15P62841 145 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 TRAF3Q13114 568 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TMED1Q13445 227 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 PRPF38BQ5VTL8 546 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 FBXO46Q6PJ61 603 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 TBC1D10CQ8IV04 446 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KSR1Q8IVT5 923 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SLITRK4Q8IW52 837 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZNF671Q8TAW3 534 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LCN9Q8WX39 176 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CENPTQ96BT3 561 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 APOL2Q9BQE5 337 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CELF4Q9BZC1 486 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 ASB8Q9H765 288 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TAGLN3Q9UI15 199 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MCM8Q9UJA3 840 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CNTNAP1P78357 1384 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RTTNQ86VV8 2226 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CCDC182A6NF36 153 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KIAA0355O15063 1070 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KRT36O76013 467 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ECHS1P30084 290 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RPL6Q02878 288 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZNF33BQ06732 778 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 DGKZQ13574 1117 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ATP1A4Q13733 1029 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SNAPC1Q16533 368 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 HECTD2Q5U5R9 776 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 IZUMO2Q6UXV1 221 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CAPN12Q6ZSI9 719 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RAB11FIP2Q7L804 512 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 FAM35AQ86V20 835 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MINDY1Q8N5J2 469 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 PPCDCQ96CD2 204 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 METTL2AQ96IZ6 378 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 BTF3L4Q96K17 158 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 COPS8Q99627 209 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 DPH2Q9BQC3 489 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 ANKHQ9HCJ1 492 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 AGO1Q9UL18 857 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 ASF1AQ9Y294 204 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TPRP12270 2363 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 SPATA31C2B4DYI2 1134 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MSH4O15457 936 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TLR5O60602 858 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ESR1P03372 595 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RPLP0P05388 317 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 ATP6V1B2P21281 511 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MATN1P21941 496 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MAGOHP61326 146 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 IFI35P80217 286 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 PLGLB1Q02325 96 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ENPP2Q13822 863 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 GRB14Q14449 540 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZNF618Q5T7W0 954 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CPTPQ5TA50 214 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KLHL17Q6TDP4 642 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZBTB49Q6ZSB9 765 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LRRC70Q7Z2Q7 622 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZBTB2Q8N680 514 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KIAA1958Q8N8K9 716 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MINDY2Q8NBR6 621 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LINC00116Q8NCU8 138 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LMX1AQ8TE12 382 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ATG4CQ96DT6 458 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CDCA5Q96FF9 252 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms