RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 COL11A2P13942 1736 aaPredicted RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 VARSP26640 1264 aaKnown RBP15.88■□□□□ 0.13
PCDH1-203ENST00000394536 ATP4BP51164 291 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
PCDH1-203ENST00000394536 IRF8Q02556 426 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 SEMA3AQ14563 771 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 SYTL3Q4VX76 610 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 PIWIL3Q7Z3Z3 882 aaKnown RBP15.88■□□□□ 0.13
PCDH1-203ENST00000394536 PIANPQ8IYJ0 282 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 DTWD1Q8N5C7 304 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 GPR156Q8NFN8 814 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 TMEM248Q9NWD8 314 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 TMEM161AQ9NX61 479 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 CD300AQ9UGN4 299 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 STK16O75716 305 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 FAM163BP0C2L3 166 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 WEE1P30291 646 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 BMXP51813 675 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 APOFQ13790 326 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 KCNA10Q16322 511 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 ENPP6Q6UWR7 440 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 KRTCAP2Q8N6L1 136 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 UROC1Q96N76 676 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 SEZ6LQ9BYH1 1024 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 ANKRD66B4E2M5 251 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 WDR47O94967 919 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 KRT8P05787 483 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 ENO2P09104 434 aaPredicted RBP15.88■□□□□ 0.13
PCDH1-203ENST00000394536 DNASE1L3Q13609 305 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 PWP1Q13610 501 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 TAF1AQ15573 450 aaPredicted RBP15.88■□□□□ 0.13
PCDH1-203ENST00000394536 ATP6AP1Q15904 470 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 RFTN2Q52LD8 501 aaPredicted RBP15.88■□□□□ 0.13
PCDH1-203ENST00000394536 LRRC73Q5JTD7 316 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 RETSATQ6NUM9 610 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 ZNF773Q6PK81 442 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 PRSS55Q6UWB4 352 aaPredicted RBP15.88■□□□□ 0.13
PCDH1-203ENST00000394536 HACD2Q6Y1H2 254 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 ZDHHC21Q8IVQ6 265 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 OR52J3Q8NH60 311 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 KRT84Q9NSB2 600 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 OSER1Q9NX31 292 aa15.88■□□□□ 0.13
PCDH1-203ENST00000394536 LY75O60449 1722 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 A0A1B0GTL3 188 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 ZNF12P17014 697 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 ACSM2AQ08AH3 577 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 NFATC3Q12968 1075 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 TRAF3Q13114 568 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 ZNF846Q147U1 533 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 ACSM2BQ68CK6 577 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 DOK6Q6PKX4 331 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 LYSMD3Q7Z3D4 306 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 GALNT10Q86SR1 603 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 SLC15A4Q8N697 577 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 CNIH3Q8TBE1 160 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 TDRD1Q9BXT4 1180 aaKnown RBP15.87■□□□□ 0.13
PCDH1-203ENST00000394536 MAGEH1Q9H213 219 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 C8orf4Q9NR00 106 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 DUS2Q9NX74 493 aaKnown RBP15.87■□□□□ 0.13
PCDH1-203ENST00000394536 TUBA8Q9NY65 449 aaPredicted RBP15.87■□□□□ 0.13
PCDH1-203ENST00000394536 FLRT1Q9NZU1 646 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 ZIM2Q9NZV7 527 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 PCDHB8Q9UN66 801 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 PCDHB3Q9Y5E6 796 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 HHLA1C9JL84 531 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 EPN2O95208 641 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 ERVPABLB-1P60509 514 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 GTDC1Q4AE62 458 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 SPRYD7Q5W111 196 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 AADATQ8N5Z0 425 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 TNKS2Q9H2K2 1166 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 TUBB1Q9H4B7 451 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 QSER1Q2KHR3 1735 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 NRXN2Q9P2S2 1712 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 ANKRD33BA6NCL7 494 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 DUSP11O75319 330 aaKnown RBP15.87■□□□□ 0.13
PCDH1-203ENST00000394536 GALNT1Q10472 559 aaPredicted RBP15.87■□□□□ 0.13
PCDH1-203ENST00000394536 ABRAXAS2Q15018 415 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 CCDC85BQ15834 202 aaPredicted RBP15.87■□□□□ 0.13
PCDH1-203ENST00000394536 POM121L1PQ3SYA9 428 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 BORAQ6PGQ7 559 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 GOLGA7Q7Z5G4 137 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 RNF180Q86T96 592 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 OR8H2Q8N162 312 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 MCFD2Q8NI22 146 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 RHEBL1Q8TAI7 183 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 GNPTGQ9UJJ9 305 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 SCML2Q9UQR0 700 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 MYO7AQ13402 2215 aa15.87■□□□□ 0.13
PCDH1-203ENST00000394536 PRAMEF11O60813 436 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 CLDN11O75508 207 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 ESR1P03372 595 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 PGRP06401 933 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 GKP32189 559 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 RPL34P49207 117 aaKnown RBP15.86■□□□□ 0.13
PCDH1-203ENST00000394536 TRIM32Q13049 653 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 MOGQ16653 247 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 ITIH5Q86UX2 942 aa15.86■□□□□ 0.13
PCDH1-203ENST00000394536 SNX29P2Q8IUI4 249 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms