RNA–Protein interactions for RNA: ENST00000381808.7

SDCBP2-203, Transcript of syndecan binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SDCBP2, Length 1,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-203ENST00000381808 TYRP1P17643 537 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 CCKBRP32239 447 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 EIF3BP55884 814 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 GABREP78334 506 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 ZFP36L1Q07352 338 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 RTP5Q14D33 572 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 LONRF1Q17RB8 773 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 TYSND1Q2T9J0 566 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 ZNF470Q6ECI4 717 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 PTRHD1Q6GMV3 140 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 CAPRIN2Q6IMN6 1127 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 FOXR1Q6PIV2 292 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 SDCCAG8Q86SQ7 713 aaPredicted RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 IGDCC3Q8IVU1 814 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 UNC5BQ8IZJ1 945 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 PDIK1LQ8N165 341 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 ZCCHC14Q8WYQ9 949 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 NCSTNQ92542 709 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 GRAMD1AQ96CP6 724 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 CCDC74BQ96LY2 380 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 EBNA1BP2Q99848 306 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 ERP44Q9BS26 406 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 CCDC86Q9H6F5 360 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 C20orf96Q9NUD7 363 aaPredicted RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 ACACBO00763 2458 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 IGF2RP11717 2491 aa18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 MAP1BP46821 2468 aaKnown RBP18.11■□□□□ 0.49
SDCBP2-203ENST00000381808 CCDC187A0A096LP49 1063 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 IGHV5-10-1A0A0J9YXX1 117 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 F8W8V4 182 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 LIN7AO14910 233 aaPredicted RBP18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 BRINP1O60477 761 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 CAPNS1P04632 268 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 OGNP20774 298 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 CCR7P32248 378 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 ELK3P41970 407 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 CSE1LP55060 971 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 RPA4Q13156 261 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 SQSTM1Q13501 440 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 THOC5Q13769 683 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 CRYMQ14894 314 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 HIF1AQ16665 826 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 CLPPQ16740 277 aaPredicted RBP18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 ZNF449Q6P9G9 518 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 CENPUQ71F23 418 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 CILP2Q8IUL8 1156 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 RBM12BQ8IXT5 1001 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 IFT20Q8IY31 132 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 RCBTB1Q8NDN9 531 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 LPGAT1Q92604 370 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 LIN37Q96GY3 246 aaPredicted RBP18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 WDR83Q9BRX9 315 aaKnown RBP18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 TSSK1BQ9BXA7 367 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 STRADBQ9C0K7 418 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 GNPTGQ9UJJ9 305 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 CHMP2BQ9UQN3 213 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 FAM169AQ9Y6X4 670 aa18.1■□□□□ 0.49
SDCBP2-203ENST00000381808 FREM2Q5SZK8 3169 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 SLC5A10A0PJK1 596 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 TMX2-CTNND1H3BSU7 103 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 IFRD1O00458 451 aaPredicted RBP18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 UBXN7O94888 489 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 AMD1P17707 334 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 RPS3P23396 243 aaKnown RBP eCLIP18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 FMO4P31512 558 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 LIMK2P53671 638 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 ARL4CP56559 192 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 C16orf72Q14CZ0 275 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 ZNF789Q5FWF6 425 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 CTSL3PQ5NE16 218 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 SNAP47Q5SQN1 464 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 RNF187Q5TA31 235 aaPredicted RBP18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 TMEM71Q6P5X7 295 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 RAB11FIP2Q7L804 512 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 PDZD3Q86UT5 571 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 LRRC6Q86X45 466 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 DENND6AQ8IWF6 608 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 BBOF1Q8ND07 529 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 OR4D9Q8NGE8 314 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 WDR36Q8NI36 951 aaKnown RBP18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 RSC1A1Q92681 617 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 CFAP36Q96G28 342 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 TCF12Q99081 682 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 EPB41L1Q9H4G0 881 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 POLR1BQ9H9Y6 1135 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 DMGDHQ9UI17 866 aaKnown RBP18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 CRYL1Q9Y2S2 319 aa18.09■□□□□ 0.49
SDCBP2-203ENST00000381808 TMEM8BA6NDV4 472 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 PFDN6O15212 129 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 THRAP10827 490 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 HGFP14210 728 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 SLC1A2P43004 574 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 LSSP48449 732 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 GFERP55789 205 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 CALCOCO2Q13137 446 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 CTBP1Q13363 440 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 KRT33BQ14525 404 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 PLCL1Q15111 1095 aa18.08■□□□□ 0.48
SDCBP2-203ENST00000381808 SPANXN3Q5MJ09 141 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms