RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 Q6ZSR9 355 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 LILRA2Q8N149 483 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 OR2T34Q8NGX1 318 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 OR2T3Q8NH03 318 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 RHBDF1Q96CC6 855 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 PPP3R2Q96LZ3 170 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 SLC52A3Q9NQ40 469 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 HEBP1Q9NRV9 189 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 SLC8A2Q9UPR5 921 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 GMEB1Q9Y692 573 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 C15orf38-AP3S2A0A0A6YYH1 394 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 AQP12BA6NM10 295 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 WASH3PC4AMC7 463 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 K7EPI3 171 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 DENRO43583 198 aaKnown RBP12.4□□□□□ -0.43
VPS16-202ENST00000380445 KATNA1O75449 491 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 ANXA5P08758 320 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 CYP2A6P11509 494 aaPredicted RBP12.4□□□□□ -0.43
VPS16-202ENST00000380445 TYRP14679 529 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 HOXA9P31269 272 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 BMPR1AP36894 532 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 MAD2L1Q13257 205 aaPredicted RBP12.4□□□□□ -0.43
VPS16-202ENST00000380445 SMU1Q2TAY7 513 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 PRR23BQ6ZRT6 265 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 ARPINQ7Z6K5 226 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 TICAM1Q8IUC6 712 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 AQP12AQ8IXF9 295 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 TMEM102Q8N9M5 508 aaPredicted RBP12.4□□□□□ -0.43
VPS16-202ENST00000380445 ARMC5Q96C12 935 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 TCEAL4Q96EI5 215 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 RAD9AQ99638 391 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 SLC2A11Q9BYW1 496 aa12.4□□□□□ -0.43
VPS16-202ENST00000380445 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 IGLV3-16A0A075B6K0 115 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 HIDE1A8MVS5 230 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 NME4O00746 187 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 TAPBPO15533 448 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 RNASEH2AO75792 299 aaKnown RBP12.39□□□□□ -0.43
VPS16-202ENST00000380445 RHOP08100 348 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 PIM1P11309 404 aaPredicted RBP12.39□□□□□ -0.43
VPS16-202ENST00000380445 EPB42P16452 691 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 SLC6A2P23975 617 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 SPINT3P49223 89 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 UFM1P61960 85 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 TRAF3Q13114 568 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 NR6A1Q15406 480 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 ATP13A5Q4VNC0 1218 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 ST13P4Q8IZP2 240 aaPredicted RBP12.39□□□□□ -0.43
VPS16-202ENST00000380445 AHI1Q8N157 1196 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 DCBLD1Q8N8Z6 715 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 VOPP1Q96AW1 172 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 EME1Q96AY2 570 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 C1orf50Q9BV19 199 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 RHBDL2Q9NX52 303 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 SLCO3A1Q9UIG8 710 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 SLC4A7Q9Y6M7 1214 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 PABPN1LA6NDY0 278 aaKnown RBP12.39□□□□□ -0.43
VPS16-202ENST00000380445 H0YJX3 145 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 FXYD1O00168 92 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 SLC28A1O00337 649 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 KPNA5O15131 536 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 RGS14O43566 566 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 XYLBO75191 536 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 WDR47O94967 919 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 ENO2P09104 434 aaPredicted RBP12.39□□□□□ -0.43
VPS16-202ENST00000380445 EBLN1P0CF75 366 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 POLR2EP19388 210 aaKnown RBP12.39□□□□□ -0.43
VPS16-202ENST00000380445 LHCGRP22888 699 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 CTNNB1P35222 781 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 INPP5AQ14642 412 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 PDK3Q15120 406 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 PHKG1Q16816 387 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 C18orf21Q32NC0 220 aaPredicted RBP12.39□□□□□ -0.43
VPS16-202ENST00000380445 CNPY1Q3B7I2 92 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 ASTLQ6HA08 431 aaPredicted RBP12.39□□□□□ -0.43
VPS16-202ENST00000380445 CYP2R1Q6VVX0 501 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 Q6ZVU0 165 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 TCAIMQ8N3R3 496 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 SFRP1Q8N474 314 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 HEPHQ9BQS7 1158 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 NTMT1Q9BV86 223 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 TLR9Q9NR96 1032 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 RAD18Q9NS91 495 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 ACTR3BQ9P1U1 418 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 B4GALT6Q9UBX8 382 aa12.39□□□□□ -0.43
VPS16-202ENST00000380445 MTCL1Q9Y4B5 1905 aaKnown RBP12.38□□□□□ -0.43
VPS16-202ENST00000380445 SLC9A3R1O14745 358 aaPredicted RBP12.38□□□□□ -0.43
VPS16-202ENST00000380445 LSM1O15116 133 aaKnown RBP12.38□□□□□ -0.43
VPS16-202ENST00000380445 HNRNPA1P09651 372 aaKnown RBP eCLIP12.38□□□□□ -0.43
VPS16-202ENST00000380445 MARVELD2Q8N4S9 558 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 PROKR1Q8TCW9 393 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 POF1BQ8WVV4 589 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 LRCH3Q96II8 777 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 ARMC1Q9NVT9 282 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 ELOVL2Q9NXB9 296 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 TRPS1Q9UHF7 1281 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 RWDD3Q9Y3V2 267 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 PCDHA9Q9Y5H5 950 aa12.38□□□□□ -0.43
VPS16-202ENST00000380445 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms