RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 MT-CO1P00395 513 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ME2P23368 584 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ACADVLP49748 655 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ARSDP51689 593 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CLCN5P51795 746 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 PKNOX1P55347 436 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 DSC2Q02487 901 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ELAVL3Q14576 367 aaKnown RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 UNC50Q53HI1 259 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ZNF470Q6ECI4 717 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ALKBH2Q6NS38 261 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 BRAT1Q6PJG6 821 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 RPS27LQ71UM5 84 aaKnown RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 USP33Q8TEY7 942 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 RSPH9Q9H1X1 276 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ATP13A3Q9H7F0 1226 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 NFKBIL1Q9UBC1 381 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 SCML1Q9UN30 329 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 SPTBN5Q9NRC6 3674 aaKnown RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ASPDHA6ND91 283 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 TRPC5OSA6NMA1 111 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 PRLP01236 227 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 FGF4P08620 206 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 IMPDH1P20839 514 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 RPS9P46781 194 aaKnown RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ALDH3B2P48448 385 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ST8SIA6P61647 398 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 RHDQ02161 417 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 FLOT2Q14254 428 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 TRIM25Q14258 630 aaKnown RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 LRRC32Q14392 662 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 PDCD2Q16342 344 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 TYSND1Q2T9J0 566 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 IL23RQ5VWK5 629 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 KANK2Q63ZY3 851 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 PAOXQ6QHF9 649 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CUZD1Q86UP6 607 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 NAT16Q8N8M0 369 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CLDN23Q96B33 292 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 HEPHQ9BQS7 1158 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ADGRE3Q9BY15 652 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 HDAC8Q9BY41 377 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 TUBB1Q9H4B7 451 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 FAM86C1Q9NVL1 165 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 NCKIPSDQ9NZQ3 722 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 HACD3Q9P035 362 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 MARCH4Q9P2E8 410 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 IKZF3Q9UKT9 509 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 AP4B1Q9Y6B7 739 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CCDC78A2IDD5 438 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CD1DP15813 335 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 PMLP29590 882 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 SERPINA4P29622 427 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CD86P42081 329 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 WNT3AP56704 352 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 TFF2Q03403 129 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 KCNC4Q03721 635 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 MESP2Q0VG99 397 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CLN3Q13286 438 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CDKN3Q16667 212 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 MMEL1Q495T6 779 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 LINGO4Q6UY18 593 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ZNF852Q6ZMS4 543 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 EPHX4Q8IUS5 362 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ST13P4Q8IZP2 240 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 PNPLA1Q8N8W4 532 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 IPMKQ8NFU5 416 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 CEP70Q8NHQ1 597 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 PIH1D2Q8WWB5 315 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 PPP1R36Q96LQ0 422 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 C1QTNF3Q9BXJ4 246 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 MRPS26Q9BYN8 205 aaKnown RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 EFCAB1Q9HAE3 211 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 POPDC3Q9HBV1 291 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 MAGEE1Q9HCI5 957 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 ARMC1Q9NVT9 282 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 IL36AQ9UHA7 158 aa7.61□□□□□ -1.19
CDKL5-202ENST00000379996 MRPS17Q9Y2R5 130 aaKnown RBP7.61□□□□□ -1.19
CDKL5-202ENST00000379996 TRIOBPQ9H2D6 2365 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 TRIM64BA6NI03 449 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 K7ERQ8 282 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 SLC7A4O43246 635 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 NARSO43776 548 aaKnown RBP7.6□□□□□ -1.19
CDKL5-202ENST00000379996 KLK8O60259 260 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 CPNE3O75131 537 aaKnown RBP7.6□□□□□ -1.19
CDKL5-202ENST00000379996 GJB3O75712 270 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 IGLV3-19P01714 112 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 PRNPP04156 253 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 LTA4HP09960 611 aaKnown RBP7.6□□□□□ -1.19
CDKL5-202ENST00000379996 ITGB7P26010 798 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 MSX2P35548 267 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-202ENST00000379996 STK19P49842 368 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-202ENST00000379996 RAD51Q06609 339 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 FZD5Q13467 585 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 NHSL2Q5HYW2 709 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 HECTD2Q5U5R9 776 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 NEPROQ6NW34 567 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 TXNDC11Q6PKC3 985 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 DSG4Q86SJ6 1040 aa7.6□□□□□ -1.19
CDKL5-202ENST00000379996 CBARPQ8N350 705 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms