RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 SSUH2Q9Y2M2 353 aa23.34■■□□□ 1.33
PFDN2-201ENST00000368010 PCDHB11Q9Y5F2 797 aa23.34■■□□□ 1.33
PFDN2-201ENST00000368010 B3GALT1Q9Y5Z6 326 aa23.34■■□□□ 1.33
PFDN2-201ENST00000368010 ZFHX4Q86UP3 3567 aa23.34■■□□□ 1.33
PFDN2-201ENST00000368010 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.33■■□□□ 1.33
PFDN2-201ENST00000368010 TMEM63AO94886 807 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 PDHA2P29803 388 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 TTPAP49638 278 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 TGIF1Q15583 401 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 ARMC3Q5W041 872 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 ANKS6Q68DC2 871 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 FAM92BQ6ZTR7 304 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 OOSP2Q86WS3 158 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 TEFMQ96QE5 360 aaKnown RBP23.33■■□□□ 1.33
PFDN2-201ENST00000368010 FERD3LQ96RJ6 166 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 ZNF768Q9H5H4 540 aaKnown RBP23.33■■□□□ 1.33
PFDN2-201ENST00000368010 MARCH4Q9P2E8 410 aaPredicted RBP23.33■■□□□ 1.33
PFDN2-201ENST00000368010 SOX13Q9UN79 622 aa23.33■■□□□ 1.33
PFDN2-201ENST00000368010 CHD6Q8TD26 2715 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 FAM208BQ5VWN6 2430 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 CFAP47Q6ZTR5 3102 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 OR5K3A6NET4 321 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 STMND1H3BQB6 276 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 CD3EAPO15446 510 aaKnown RBP23.32■■□□□ 1.32
PFDN2-201ENST00000368010 MLNP12872 115 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 SEPHS1P49903 392 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 BOP1Q14137 746 aaKnown RBP23.32■■□□□ 1.32
PFDN2-201ENST00000368010 SYTL3Q4VX76 610 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 CACHD1Q5VU97 1274 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 GPR155Q7Z3F1 870 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 LDB1Q86U70 411 aaPredicted RBP23.32■■□□□ 1.32
PFDN2-201ENST00000368010 MPP5Q8N3R9 675 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 ACVR1CQ8NER5 493 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 MFSD3Q96ES6 412 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 TSSK1BQ9BXA7 367 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 CPNE5Q9HCH3 593 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 XAB2Q9HCS7 855 aaKnown RBP23.32■■□□□ 1.32
PFDN2-201ENST00000368010 FBXO8Q9NRD0 319 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 HRASLS2Q9NWW9 162 aa23.32■■□□□ 1.32
PFDN2-201ENST00000368010 SIDT1Q9NXL6 827 aaKnown RBP23.32■■□□□ 1.32
PFDN2-201ENST00000368010 KIF1CO43896 1103 aaKnown RBP23.31■■□□□ 1.32
PFDN2-201ENST00000368010 AVILO75366 819 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 PPP1CAP62136 330 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 PLOD1Q02809 727 aaPredicted RBP23.31■■□□□ 1.32
PFDN2-201ENST00000368010 PPP1R7Q15435 360 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 PAPD7Q5XG87 772 aaKnown RBP23.31■■□□□ 1.32
PFDN2-201ENST00000368010 ARMC6Q6NXE6 501 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 CASC4Q6P4E1 433 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 CES3Q6UWW8 571 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 CEACAM20Q6UY09 585 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 CAND1Q86VP6 1230 aaKnown RBP23.31■■□□□ 1.32
PFDN2-201ENST00000368010 DTX1Q86Y01 620 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 OTUD6BQ8N6M0 293 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 MCUQ8NE86 351 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 UBXN4Q92575 508 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 TFGQ92734 400 aaPredicted RBP23.31■■□□□ 1.32
PFDN2-201ENST00000368010 CCNL2Q96S94 520 aaPredicted RBP23.31■■□□□ 1.32
PFDN2-201ENST00000368010 CD180Q99467 661 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 NAPGQ99747 312 aaPredicted RBP23.31■■□□□ 1.32
PFDN2-201ENST00000368010 CTRCQ99895 268 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 MVB12BQ9H7P6 319 aa23.31■■□□□ 1.32
PFDN2-201ENST00000368010 PTPRQQ9UMZ3 2332 aa23.3■■□□□ 1.32
PFDN2-201ENST00000368010 PRMT5O14744 637 aaPredicted RBP23.3■■□□□ 1.32
PFDN2-201ENST00000368010 VAPBO95292 243 aa23.3■■□□□ 1.32
PFDN2-201ENST00000368010 VAC14Q08AM6 782 aa23.3■■□□□ 1.32
PFDN2-201ENST00000368010 BRD3Q15059 726 aa23.3■■□□□ 1.32
PFDN2-201ENST00000368010 DNTTIP2Q5QJE6 756 aaKnown RBP23.3■■□□□ 1.32
PFDN2-201ENST00000368010 KLHL6Q8WZ60 621 aa23.3■■□□□ 1.32
PFDN2-201ENST00000368010 CAPZA3Q96KX2 299 aa23.3■■□□□ 1.32
PFDN2-201ENST00000368010 ZPBPQ9BS86 351 aa23.3■■□□□ 1.32
PFDN2-201ENST00000368010 DDX47Q9H0S4 455 aaKnown RBP23.3■■□□□ 1.32
PFDN2-201ENST00000368010 SAMD15Q9P1V8 674 aa23.3■■□□□ 1.32
PFDN2-201ENST00000368010 ZFYVE26Q68DK2 2539 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 SLC5A10A0PJK1 596 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 CTAGE9A4FU28 777 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 OR6C74A6NCV1 312 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 GOLGA8MH3BSY2 632 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 POLR1CO15160 346 aaPredicted RBP23.29■■□□□ 1.32
PFDN2-201ENST00000368010 NDUFS3O75489 264 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 ITGB6P18564 788 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 PAMP19021 973 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 ARNTP27540 789 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 FOXM1Q08050 763 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 PRKAA1Q13131 559 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 ITPR1Q14643 2758 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 KIAA0930Q6ICG6 404 aaPredicted RBP23.29■■□□□ 1.32
PFDN2-201ENST00000368010 MRNIPQ6NTE8 343 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 CCDC81Q6ZN84 652 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 LCN9Q8WX39 176 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 SERPINB12Q96P63 405 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 APMAPQ9HDC9 416 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 SAR1BQ9Y6B6 198 aa23.29■■□□□ 1.32
PFDN2-201ENST00000368010 AHCTF1Q8WYP5 2266 aa23.28■■□□□ 1.32
PFDN2-201ENST00000368010 TLCD2A6NGC4 264 aa23.28■■□□□ 1.32
PFDN2-201ENST00000368010 SDR42E2A6NKP2 422 aa23.28■■□□□ 1.32
PFDN2-201ENST00000368010 ATP1A2P50993 1020 aa23.28■■□□□ 1.32
PFDN2-201ENST00000368010 MANEAQ5SRI9 462 aa23.28■■□□□ 1.32
PFDN2-201ENST00000368010 ARHGAP40Q5TG30 622 aa23.28■■□□□ 1.32
PFDN2-201ENST00000368010 PTRHD1Q6GMV3 140 aaKnown RBP23.28■■□□□ 1.32
PFDN2-201ENST00000368010 NAPRTQ6XQN6 538 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms