RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 C9orf72Q96LT7 481 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 RUNDC3BQ96NL0 473 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 TGM7Q96PF1 710 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 B3GNT4Q9C0J1 378 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 RAB33BQ9H082 229 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 OCIAD1Q9NX40 245 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 RNF14Q9UBS8 474 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 EPHA6Q9UF33 1036 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 SLC24A2Q9UI40 661 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 ACSL6Q9UKU0 697 aa16.62■□□□□ 0.25
FAM3D-201ENST00000358781 FAM237BA0A1B0GVD1 139 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 EFCAB7A8K855 629 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 B4E171 279 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 C9orf172C9J069 976 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 PRMT5O14744 637 aaPredicted RBP16.61■□□□□ 0.25
FAM3D-201ENST00000358781 PRAMEF10O60809 474 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 ANKRD34CP0C6C1 535 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 TSPAN7P41732 249 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 PAFAH1B1P43034 410 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 ABCG1P45844 678 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 LEPRP48357 1165 aaKnown RBP16.61■□□□□ 0.25
FAM3D-201ENST00000358781 ARCN1P48444 511 aaKnown RBP16.61■□□□□ 0.25
FAM3D-201ENST00000358781 KLHL35Q6PF15 583 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 SYDE1Q6ZW31 735 aaPredicted RBP16.61■□□□□ 0.25
FAM3D-201ENST00000358781 PDZD3Q86UT5 571 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 FAM129CQ86XR2 697 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 OTUD6BQ8N6M0 293 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 ZDHHC12Q96GR4 267 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 TAAR9Q96RI9 348 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 DPH1Q9BZG8 443 aa16.61■□□□□ 0.25
FAM3D-201ENST00000358781 FAM208BQ5VWN6 2430 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 SLC5A10A0PJK1 596 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 CCDC188H7C350 402 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 DNALI1O14645 258 aaPredicted RBP16.6■□□□□ 0.25
FAM3D-201ENST00000358781 TOX3O15405 576 aaPredicted RBP16.6■□□□□ 0.25
FAM3D-201ENST00000358781 NDUFS3O75489 264 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 PAMP19021 973 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 IVDP26440 423 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 DR1Q01658 176 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 PLOD1Q02809 727 aaPredicted RBP16.6■□□□□ 0.25
FAM3D-201ENST00000358781 BOP1Q14137 746 aaKnown RBP16.6■□□□□ 0.25
FAM3D-201ENST00000358781 BRD3Q15059 726 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 COL28A1Q2UY09 1125 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 ANKRD20A4Q4UJ75 823 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 SYTL3Q4VX76 610 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 TMEM164Q5U3C3 297 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 MRNIPQ6NTE8 343 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 IRGCQ6NXR0 463 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 NAPRTQ6XQN6 538 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 PRSS42Q7Z5A4 293 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 PCGF5Q86SE9 256 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 SDCCAG8Q86SQ7 713 aaPredicted RBP16.6■□□□□ 0.25
FAM3D-201ENST00000358781 AGGF1Q8N302 714 aaeCLIP16.6■□□□□ 0.25
FAM3D-201ENST00000358781 BMPERQ8N8U9 685 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 ACVR1CQ8NER5 493 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 ART4Q93070 314 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 FCRL3Q96P31 734 aaPredicted RBP16.6■□□□□ 0.25
FAM3D-201ENST00000358781 FERD3LQ96RJ6 166 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 TRIM56Q9BRZ2 755 aaKnown RBP16.6■□□□□ 0.25
FAM3D-201ENST00000358781 CARD6Q9BX69 1037 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 TSSK1BQ9BXA7 367 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 P2RY12Q9H244 342 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 MVB12BQ9H7P6 319 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 SLC39A1Q9NY26 324 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 FOXJ2Q9P0K8 574 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 PCDHGA3Q9Y5H0 932 aa16.6■□□□□ 0.25
FAM3D-201ENST00000358781 BHMG1C9JSJ3 638 aaPredicted RBP16.59■□□□□ 0.25
FAM3D-201ENST00000358781 GOLGA8KD6RF30 607 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 GOLGA8TH3BQL2 631 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 ITGB6P18564 788 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 RPS3P23396 243 aaKnown RBP eCLIP16.59■□□□□ 0.25
FAM3D-201ENST00000358781 CASQ1P31415 396 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 PPP1CAP62136 330 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 ETF1P62495 437 aaKnown RBP16.59■□□□□ 0.25
FAM3D-201ENST00000358781 MC2RQ01718 297 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 TLE3Q04726 772 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 DHX34Q14147 1143 aaKnown RBP16.59■□□□□ 0.25
FAM3D-201ENST00000358781 TYSND1Q2T9J0 566 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 IZUMO3Q5VZ72 239 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 TMEM135Q86UB9 458 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 HOOK3Q86VS8 718 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 LRRC6Q86X45 466 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 PHC3Q8NDX5 983 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 LKAAEAR1Q8TD35 194 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 TFGQ92734 400 aaPredicted RBP16.59■□□□□ 0.25
FAM3D-201ENST00000358781 PMEPA1Q969W9 287 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 ZNF669Q96BR6 464 aaPredicted RBP16.59■□□□□ 0.25
FAM3D-201ENST00000358781 SIGLEC10Q96LC7 697 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 TCF12Q99081 682 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 DDA1Q9BW61 102 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 ZNF768Q9H5H4 540 aaKnown RBP16.59■□□□□ 0.25
FAM3D-201ENST00000358781 GNPTGQ9UJJ9 305 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 MAD1L1Q9Y6D9 718 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 RPS6KL1Q9Y6S9 549 aa16.59■□□□□ 0.25
FAM3D-201ENST00000358781 OR6C74A6NCV1 312 aa16.58■□□□□ 0.24
FAM3D-201ENST00000358781 OR5K3A6NET4 321 aa16.58■□□□□ 0.24
FAM3D-201ENST00000358781 IQCF5A8MTL0 148 aa16.58■□□□□ 0.24
FAM3D-201ENST00000358781 KLK10O43240 276 aa16.58■□□□□ 0.24
FAM3D-201ENST00000358781 KIF1CO43896 1103 aaKnown RBP16.58■□□□□ 0.24
FAM3D-201ENST00000358781 RASSF9O75901 435 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms